RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 KIF5CO60282 957 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 RNF40O75150 1001 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF189O75820 626 aaPredicted RBP9.29□□□□□ -0.92
CIRBP-218ENST00000588344 KRT1P04264 644 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 TNNT1P13805 278 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 CXCL12P48061 93 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 NR2C2P49116 596 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 PEX5P50542 639 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 CCR3P51677 355 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 CLCN6P51797 869 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 DGKEP52429 567 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ENPP2Q13822 863 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 PAFAH1B3Q15102 231 aaKnown RBP9.29□□□□□ -0.92
CIRBP-218ENST00000588344 TAZQ16635 292 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ATP13A4Q4VNC1 1196 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ANKRD20A8PQ5CZ79 823 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 CWF19L1Q69YN2 538 aaKnown RBP9.29□□□□□ -0.92
CIRBP-218ENST00000588344 IL31Q6EBC2 164 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 SYT13Q7L8C5 426 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 CHPFQ8IZ52 775 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 CAMKK1Q8N5S9 505 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF513Q8N8E2 541 aaPredicted RBP9.29□□□□□ -0.92
CIRBP-218ENST00000588344 RAPGEF5Q92565 580 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ARHGEF2Q92974 986 aaKnown RBP9.29□□□□□ -0.92
CIRBP-218ENST00000588344 FAF2Q96CS3 445 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 TRIM44Q96DX7 344 aaPredicted RBP9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ALG14Q96F25 216 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 HES6Q96HZ4 224 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 RNF157Q96PX1 679 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 MAGEB5Q9BZ81 275 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 BRD8Q9H0E9 1235 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 LRRC19Q9H756 370 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 FBRSQ9HAH7 460 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 ATP13A1Q9HD20 1204 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 HAUS2Q9NVX0 235 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 DLGAP2Q9P1A6 1054 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 DNAI1Q9UI46 699 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 SLC25A13Q9UJS0 675 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 MMP17Q9ULZ9 603 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 NEU3Q9UQ49 428 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 JRKLQ9Y4A0 524 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 HYOU1Q9Y4L1 999 aa9.29□□□□□ -0.92
CIRBP-218ENST00000588344 TCF20Q9UGU0 1960 aaKnown RBP9.29□□□□□ -0.92
CIRBP-218ENST00000588344 C3orf70A6NLC5 250 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 RASA4BC9J798 803 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 DCLK1O15075 740 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 RASA4O43374 803 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 SYNCRIPO60506 623 aaKnown RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 ALDH1A2O94788 518 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 PAPSS2O95340 614 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 DCNP07585 359 aaKnown RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 AMPD1P23109 780 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 MZF1P28698 734 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 AVPR2P30518 371 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 HOXA6P31267 233 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 PTPN7P35236 360 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 TIE1P35590 1138 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 GJC1P36383 396 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 CDKN2BP42772 138 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 IRAK1P51617 712 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF33AQ06730 810 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 SERINC3Q13530 473 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 RFTN1Q14699 578 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 STARD3Q14849 445 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 RPS6KA1Q15418 735 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 PPP2R5EQ16537 467 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 FUT11Q495W5 492 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 INO80DQ53TQ3 878 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 C2orf27AQ580R0 203 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 TFDP3Q5H9I0 405 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 MEI1Q5TIA1 1274 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 AFMIDQ63HM1 303 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 TMEM215Q68D42 235 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 NAIF1Q69YI7 327 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 SERPINA13PQ6UXR4 307 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 SPOCD1Q6ZMY3 1216 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 REXO1L1PQ8IX06 675 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 APCDD1Q8J025 514 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 IL17RCQ8NAC3 791 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 RPLP0P6Q8NHW5 317 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 PCDH19Q8TAB3 1148 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 WFDC5Q8TCV5 224 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 EZH1Q92800 747 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 ISG20Q96AZ6 181 aaKnown RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 CCDC114Q96M63 670 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 GABRG3Q99928 467 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 POLMQ9NP87 494 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 INTS6Q9UL03 887 aaKnown RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 ERVW-1Q9UQF0 538 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 HS3ST2Q9Y278 367 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-218ENST00000588344 CAPN6Q9Y6Q1 641 aa9.28□□□□□ -0.92
CIRBP-218ENST00000588344 TTC28Q96AY4 2481 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 TRIOO75962 3097 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 A0A0D9SEW6 157 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 A0A0U1RQJ8 604 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 TARSL2A2RTX5 802 aaKnown RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 CBX4O00257 560 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 APOL1O14791 398 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms