RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 FZD4Q9ULV1 537 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 APOBEC2Q9Y235 224 aaKnown RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 OR51B4Q9Y5P0 310 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 FAM221BA6H8Z2 402 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 TMEM8BA6NDV4 472 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 FLRT2O43155 660 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 ADH1BP00325 375 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 DRD3P35462 400 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 OXCT1P55809 520 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 C21orf59P57076 290 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 SNX16P57768 344 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 SUZ12Q15022 739 aaKnown RBP14.75□□□□□ -0.05
VMP1-206ENST00000587945 ALFQ53S48 1182 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 SND1Q7KZF4 910 aaKnown RBP eCLIP14.75□□□□□ -0.055e-7■■■□□ 17.7
VMP1-206ENST00000587945 TMEM35BQ8NCS4 154 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 SPAG5Q96R06 1193 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 NAA15Q9BXJ9 866 aaKnown RBP14.75□□□□□ -0.05
VMP1-206ENST00000587945 ACE2Q9BYF1 805 aaPredicted RBP14.75□□□□□ -0.05
VMP1-206ENST00000587945 TKTL2Q9H0I9 626 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 AASDHPPTQ9NRN7 309 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 TOR4AQ9NXH8 423 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 TAB2Q9NYJ8 693 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 VPS28Q9UK41 221 aa14.75□□□□□ -0.05
VMP1-206ENST00000587945 AKAP13Q12802 2813 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 SRRM3A6NNA2 597 aaPredicted RBP14.74□□□□□ -0.05
VMP1-206ENST00000587945 C10orf142B7Z368 130 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 VILLO15195 856 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 ATP9BO43861 1147 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 BNIP3LO60238 219 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 CLDN11O75508 207 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 MT-CO1P00395 513 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 UCHL3P15374 230 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 CDH5P33151 784 aaPredicted RBP14.74□□□□□ -0.05
VMP1-206ENST00000587945 CXCR3P49682 368 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 CCT8P50990 548 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 PPP2CBP62714 309 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 PPP2CAP67775 309 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 DLG2Q15700 870 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 TCP11X2Q5H9J9 407 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 FAM102AQ5T9C2 384 aaPredicted RBP14.74□□□□□ -0.05
VMP1-206ENST00000587945 SMYD5Q6GMV2 418 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 LRSAM1Q6UWE0 723 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 Q6ZVU0 165 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 NOP9Q86U38 636 aaKnown RBP14.74□□□□□ -0.05
VMP1-206ENST00000587945 XYLT1Q86Y38 959 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 MARCH9Q86YJ5 346 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 ZDHHC17Q8IUH5 632 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 OR8D1Q8WZ84 308 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 C18orf8Q96DM3 657 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 TBCBQ99426 244 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 CDC6Q99741 560 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 MUC3BQ9H195 1237 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 WDCPQ9H6R7 721 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 ARHGEF38Q9NXL2 777 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 SLC25A13Q9UJS0 675 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 KNL1Q8NG31 2342 aa14.74□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3DA0A087WVF3 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3IA0A087WXS9 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3EA0A087X179 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3KA0A087X1G2 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3FA6NER0 549 aaPredicted RBP14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3LB9A6J9 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 GOLGA8SH3BPF8 625 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 K7ERQ8 282 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 SNAP91O60641 907 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 RTN2O75298 545 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 MMEP08473 750 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3HP0C7X1 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 FLT3P36888 993 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 GABRB2P47870 512 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 KLK7P49862 253 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 CCR5P51681 352 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 CDH4P55283 916 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 DEUP1Q05D60 604 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 SCAPQ12770 1279 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 MTA1Q13330 715 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 C5orf22Q49AR2 442 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 CCDC157Q569K6 752 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 BRMS1LQ5PSV4 323 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3GQ6DHY5 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3CQ6IPX1 549 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TRNP1Q6NT89 227 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 CCNI2Q6ZMN8 369 aaPredicted RBP14.73□□□□□ -0.05
VMP1-206ENST00000587945 TFAP2DQ7Z6R9 452 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 ERICH1Q86X53 443 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 GATAD2AQ86YP4 633 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 ZNF683Q8IZ20 524 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D3Q8IZP1 549 aaPredicted RBP14.73□□□□□ -0.05
VMP1-206ENST00000587945 SH2D3CQ8N5H7 860 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 CPA5Q8WXQ8 436 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 NT5C3BQ969T7 300 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 SERAC1Q96JX3 654 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 PPP1R9BQ96SB3 815 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 PSMB7Q99436 277 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 RRN3Q9NYV6 651 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 MPP6Q9NZW5 540 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 STAP1Q9ULZ2 295 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 TBC1D30Q9Y2I9 924 aa14.73□□□□□ -0.05
VMP1-206ENST00000587945 WDFY3Q8IZQ1 3526 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms