RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GPSM3Q9Y4H4 160 aa8.12□□□□□ -1.11
VMP1-204ENST00000587259 BPTFQ12830 3046 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.11□□□□□ -1.11
VMP1-204ENST00000587259 MYO1FO00160 1098 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 PSTPIP1O43586 416 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 CILPO75339 1184 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 AP1G2O75843 785 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 TYRP14679 529 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 CD58P19256 250 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 MMP8P22894 467 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 ADORA2BP29275 332 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 CTNNA1P35221 906 aaKnown RBP8.11□□□□□ -1.11
VMP1-204ENST00000587259 MAP3K7CLP57077 242 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 PTP4A2Q12974 167 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 GRIK2Q13002 908 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 SGO2Q562F6 1265 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 NAA35Q5VZE5 725 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 GRAMD4Q6IC98 578 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 C8orf74Q6P047 294 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 LAYNQ6UX15 382 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 NAXDQ8IW45 347 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 FUKQ8N0W3 1084 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 RASGEF1CQ8N431 466 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 ZCCHC9Q8N567 271 aaKnown RBP8.11□□□□□ -1.11
VMP1-204ENST00000587259 C12orf29Q8N999 325 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 SORCS1Q8WY21 1168 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 TMEM176AQ96HP8 235 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 PKNOX2Q96KN3 472 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 MRGPRX1Q96LB2 322 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 PCDHB18PQ96TA0 734 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 NCAPGQ9BPX3 1015 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 KLF16Q9BXK1 252 aaPredicted RBP8.11□□□□□ -1.11
VMP1-204ENST00000587259 ELOVL4Q9GZR5 314 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 NACA2Q9H009 215 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 OSGEPQ9NPF4 335 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 TAS2R14Q9NYV8 317 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 TBC1D14Q9P2M4 693 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.11□□□□□ -1.11
VMP1-204ENST00000587259 IP6K2Q9UHH9 426 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 ANAPC7Q9UJX3 599 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 V9GYY5 206 aaPredicted RBP8.11□□□□□ -1.11
VMP1-204ENST00000587259 ADAMTS20P59510 1910 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 PLXNB3Q9ULL4 1909 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 PLXND1Q9Y4D7 1925 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 IGSF10Q6WRI0 2623 aa8.11□□□□□ -1.11
VMP1-204ENST00000587259 SMG1Q96Q15 3661 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 FAM149AA5PLN7 773 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 CEP104O60308 925 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 TLR5O60602 858 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 SRGAP2O75044 1071 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 NDUFS2O75306 463 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 RTN3O95197 1032 aaPredicted RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 HMBSP08397 361 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 CISD3P0C7P0 127 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 ZDHHC11BP0C7U3 371 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 CD19P15391 556 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 PFKLP17858 780 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 TNFRSF8P28908 595 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 PPP3CCP48454 512 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 CLDN6P56747 220 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 RWDD2BP57060 319 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 SLC8A3P57103 927 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 BNC1Q01954 994 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 GPS2Q13227 327 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 BYSLQ13895 437 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 PIGHQ14442 188 aaPredicted RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 CNGA2Q16280 664 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 FUT11Q495W5 492 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 HSF5Q4G112 596 aaPredicted RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 CCDC157Q569K6 752 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 PLEKHA7Q6IQ23 1121 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 DNAJC24Q6P3W2 148 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 SLC36A4Q6YBV0 504 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 MAATS1Q7Z4T9 603 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 PDZD3Q86UT5 571 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 FAM124AQ86V42 546 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 ERICH1Q86X53 443 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 DDX42Q86XP3 938 aaKnown RBP eCLIP8.1□□□□□ -1.11
VMP1-204ENST00000587259 ZDHHC17Q8IUH5 632 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 EIF1ADQ8N9N8 165 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 C3orf20Q8ND61 904 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 CEP76Q8TAP6 659 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 SLC2A14Q8TDB8 520 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 FNIP1Q8TF40 1166 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 SETD7Q8WTS6 366 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 COG1Q8WTW3 980 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 ARHGEF26Q96DR7 871 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 CYFIP2Q96F07 1278 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 TOE1Q96GM8 510 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 TNIP3Q96KP6 325 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 TWNKQ96RR1 684 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 ZSWIM1Q9BR11 485 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 GPR174Q9BXC1 333 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 MKRN2Q9H000 416 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 SYNCQ9H7C4 482 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 PRDM16Q9HAZ2 1276 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 NMUR1Q9HB89 426 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms