RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 SLC25A13Q9UJS0 675 aa19.27■□□□□ 0.68
ATG4D-203ENST00000585752 A0A1B0GVM2 712 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 TCAF2A6NFQ2 919 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 FAM47DPA6NHR8 397 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 GOLGA6L6A8MZA4 724 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 MFAP3LO75121 409 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 SIN3BO75182 1162 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 PDGFRAP16234 1089 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 PMLP29590 882 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 ACSL1P33121 698 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 ADKP55263 362 aaKnown RBP19.26■□□□□ 0.67
ATG4D-203ENST00000585752 PITX1P78337 314 aaPredicted RBP19.26■□□□□ 0.67
ATG4D-203ENST00000585752 DEUP1Q05D60 604 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 HNRNPDQ14103 355 aaKnown RBP19.26■□□□□ 0.67
ATG4D-203ENST00000585752 ADAT2Q7Z6V5 191 aaKnown RBP19.26■□□□□ 0.67
ATG4D-203ENST00000585752 PHLDB2Q86SQ0 1253 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 MYEOVQ96EZ4 313 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 TRIM11Q96F44 468 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 RPL10LQ96L21 214 aaKnown RBP19.26■□□□□ 0.67
ATG4D-203ENST00000585752 RSPH9Q9H1X1 276 aaPredicted RBP19.26■□□□□ 0.67
ATG4D-203ENST00000585752 ABHD10Q9NUJ1 306 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 VANGL2Q9ULK5 521 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 PCDH15Q96QU1 1955 aa19.26■□□□□ 0.67
ATG4D-203ENST00000585752 RTN2O75298 545 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 FSBPO95073 299 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 CER1O95813 267 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 GZMAP12544 262 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 SLC14A1Q13336 389 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 AUHQ13825 339 aaKnown RBP19.25■□□□□ 0.67
ATG4D-203ENST00000585752 ACCSLQ4AC99 568 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 BRMS1LQ5PSV4 323 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 FBXL22Q6P050 247 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 LRRC31Q6UY01 552 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 USP30Q70CQ3 517 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 MON1BQ7L1V2 547 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 CIR1Q86X95 450 aaPredicted RBP19.25■□□□□ 0.67
ATG4D-203ENST00000585752 APCDD1Q8J025 514 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 VCPIP1Q96JH7 1222 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 LMLNQ96KR4 655 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 DNAJC7Q99615 494 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 FBXL12Q9NXK8 326 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 ADAMTS1Q9UHI8 967 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 INTS6Q9UL03 887 aaKnown RBP19.25■□□□□ 0.67
ATG4D-203ENST00000585752 CNOT1A5YKK6 2376 aaKnown RBP19.25■□□□□ 0.67
ATG4D-203ENST00000585752 SPTBN2O15020 2390 aa19.25■□□□□ 0.67
ATG4D-203ENST00000585752 TTC34A8MYJ7 566 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 RNASEH2AO75792 299 aaKnown RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 FTLP02792 175 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 KRT3P12035 628 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 CTSOP43234 321 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 AFF3P51826 1226 aaKnown RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 GRIK2Q13002 908 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 SEMA3BQ13214 749 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 CST6Q15828 149 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 HGSNATQ68CP4 663 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 DCUN1D2Q6PH85 259 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 MMAAQ8IVH4 418 aaKnown RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 MCOLN2Q8IZK6 566 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 C3orf20Q8ND61 904 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 SYT11Q9BT88 431 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 TKTL2Q9H0I9 626 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 MUC3BQ9H195 1237 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 PABPC3Q9H361 631 aaKnown RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 MTG2Q9H4K7 406 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 C6orf106Q9H6K1 298 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 DNAAF2Q9NVR5 837 aaKnown RBP19.24■□□□□ 0.67
ATG4D-203ENST00000585752 HS3ST4Q9Y661 456 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 NUMA1Q14980 2115 aa19.24■□□□□ 0.67
ATG4D-203ENST00000585752 LRRC72A6NJI9 287 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 UPK3BL1B0FP48 263 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 UPK3BL2E5RIL1 263 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 DDX3XO00571 662 aaKnown RBP eCLIP19.23■□□□□ 0.673e-7■■■■□ 19.9
ATG4D-203ENST00000585752 PAGE1O75459 146 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 CLDN11O75508 207 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 ADH1BP00325 375 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 PLEKP08567 350 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-203ENST00000585752 SDC4P31431 198 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 HNRNPH3P31942 346 aaKnown RBP19.23■□□□□ 0.67
ATG4D-203ENST00000585752 PSMD8P48556 350 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 GSCP56915 257 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-203ENST00000585752 EIF4EBP2Q13542 120 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-203ENST00000585752 ACBD5Q5T8D3 534 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-203ENST00000585752 DSG4Q86SJ6 1040 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 OR2I1PQ8NGU4 316 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 SKA1Q96BD8 255 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 ZNF653Q96CK0 615 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 MRGPRX3Q96LB0 322 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 PRMT1Q99873 361 aaKnown RBP19.23■□□□□ 0.67
ATG4D-203ENST00000585752 TAS2R14Q9NYV8 317 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 SLCO3A1Q9UIG8 710 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 VPS28Q9UK41 221 aa19.23■□□□□ 0.67
ATG4D-203ENST00000585752 A0A1W2PP55 124 aa19.22■□□□□ 0.67
ATG4D-203ENST00000585752 MID1O15344 667 aa19.22■□□□□ 0.67
ATG4D-203ENST00000585752 AKR1B10O60218 316 aa19.22■□□□□ 0.67
ATG4D-203ENST00000585752 IL1BP01584 269 aa19.22■□□□□ 0.67
ATG4D-203ENST00000585752 MYBL1P10243 752 aa19.22■□□□□ 0.67
ATG4D-203ENST00000585752 MZF1P28698 734 aaPredicted RBP19.22■□□□□ 0.67
ATG4D-203ENST00000585752 SLC8A1P32418 973 aa19.22■□□□□ 0.67
ATG4D-203ENST00000585752 EIF4A3P38919 411 aaKnown RBP19.22■□□□□ 0.67
ATG4D-203ENST00000585752 NUMBP49757 651 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms