RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 HPCAL4Q9UM19 191 aa17.35■□□□□ 0.37
HMG20B-215ENST00000585741 DUSP12Q9UNI6 340 aa17.35■□□□□ 0.37
HMG20B-215ENST00000585741 FAM186AA6NE01 2351 aa17.35■□□□□ 0.37
HMG20B-215ENST00000585741 MFSD11O43934 449 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 NEBLO76041 1014 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 AOC1P19801 751 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 HOXD9P28356 352 aaPredicted RBP17.34■□□□□ 0.37
HMG20B-215ENST00000585741 YBEYP58557 167 aaPredicted RBP17.34■□□□□ 0.37
HMG20B-215ENST00000585741 EIF3EP60228 445 aaKnown RBP17.34■□□□□ 0.37
HMG20B-215ENST00000585741 OTUD4Q01804 1114 aaKnown RBP17.34■□□□□ 0.37
HMG20B-215ENST00000585741 ADCY2Q08462 1091 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 PARP15Q460N3 678 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 PREPLQ4J6C6 727 aaPredicted RBP17.34■□□□□ 0.37
HMG20B-215ENST00000585741 IL31Q6EBC2 164 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 NPNTQ6UXI9 565 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 UMODL1-AS1Q8N2C9 162 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 ATPAF2Q8N5M1 289 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 NAT16Q8N8M0 369 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 TTC8Q8TAM2 541 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 ACTL9Q8TC94 416 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 NSMCE1Q8WV22 266 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 EXOC4Q96A65 974 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 SPON2Q9BUD6 331 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 SLC2A11Q9BYW1 496 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 MAGEH1Q9H213 219 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 KIAA1522Q9P206 1035 aaPredicted RBP17.34■□□□□ 0.37
HMG20B-215ENST00000585741 NEU3Q9UQ49 428 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 DCHS1Q96JQ0 3298 aa17.34■□□□□ 0.37
HMG20B-215ENST00000585741 TCRBV7S2A1N4TA0A589 114 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 ILVBLA1L0T0 632 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 CTAGE15A4D2H0 777 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 RASA4BC9J798 803 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC188H7C350 402 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 GFRA2O00451 464 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 RASA4O43374 803 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 NARSO43776 548 aaKnown RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 PENKP01210 267 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 CTAGE8P0CG41 777 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 GNA12Q03113 381 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 GBE1Q04446 702 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 TNK2Q07912 1038 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 KLF1Q13351 362 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 RNF219Q5W0B1 726 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 DARS2Q6PI48 645 aaKnown RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 ZNF783Q6ZMS7 281 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 NUDT18Q6ZVK8 323 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 CTAGE6Q86UF2 777 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 ZC3H18Q86VM9 953 aaKnown RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 LRRC49Q8IUZ0 686 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 CDKL3Q8IVW4 592 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 CTAGE4Q8IX94 777 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 FIBINQ8TAL6 211 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 C1orf54Q8WWF1 131 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 MAGOHBQ96A72 148 aaKnown RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 HERPUD2Q9BSE4 406 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 BRD8Q9H0E9 1235 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 HPS4Q9NQG7 708 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 DNAJC17Q9NVM6 304 aaKnown RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 SAE1Q9UBE0 346 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-215ENST00000585741 VPS28Q9UK41 221 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 MFHAS1Q9Y4C4 1052 aa17.33■□□□□ 0.36
HMG20B-215ENST00000585741 GVINP1Q7Z2Y8 2422 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 DOCK8Q8NF50 2099 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.32■□□□□ 0.36
HMG20B-215ENST00000585741 HOXC11O43248 304 aaPredicted RBP17.32■□□□□ 0.36
HMG20B-215ENST00000585741 ZNF189O75820 626 aaPredicted RBP17.32■□□□□ 0.36
HMG20B-215ENST00000585741 MAP3K6O95382 1288 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 PECAM1P16284 738 aaPredicted RBP17.32■□□□□ 0.36
HMG20B-215ENST00000585741 DGKGP49619 791 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 PFKPQ01813 784 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 AP1B1Q10567 949 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 SNX1Q13596 522 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 SLC12A1Q13621 1099 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 NOMO1Q15155 1222 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 CCNG2Q16589 344 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 GRAMD4Q6IC98 578 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 SLC44A3Q8N4M1 653 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 FLCNQ8NFG4 579 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 TFB1MQ8WVM0 346 aaKnown RBP17.32■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC114Q96M63 670 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 RUNDC3BQ96NL0 473 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 FAM118BQ9BPY3 351 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 SLC39A8Q9C0K1 460 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 SP110Q9HB58 689 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 ATP13A1Q9HD20 1204 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 NDFIP2Q9NV92 336 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 GTSE1Q9NYZ3 720 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 DTLQ9NZJ0 730 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 DEC1Q9P2X7 70 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 FEZ2Q9UHY8 353 aaPredicted RBP17.32■□□□□ 0.36
HMG20B-215ENST00000585741 ZNF148Q9UQR1 794 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 TBC1D30Q9Y2I9 924 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 WDR87Q6ZQQ6 2873 aa17.32■□□□□ 0.36
HMG20B-215ENST00000585741 HACD1B0YJ81 288 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 PHF2O75151 1096 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 STK10O94804 968 aaKnown RBP17.31■□□□□ 0.36
HMG20B-215ENST00000585741 RBP3P10745 1247 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 CSKP41240 450 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 PAPOLAP51003 745 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms