RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 KRT36O76013 467 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PTPN3P26045 913 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 NMBRP28336 390 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PTPN4P29074 926 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 SCNN1BP51168 640 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 CDK16Q00536 496 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 IRF9Q00978 393 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 PWP2Q15269 919 aaKnown RBP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ARHGAP17Q68EM7 881 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 CGB2Q6NT52 195 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 AGMOQ6ZNB7 445 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 USP13Q92995 863 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ERLEC1Q96DZ1 483 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 QKIQ96PU8 341 aaKnown RBP eCLIP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 WDR83Q9BRX9 315 aaKnown RBP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 FRMD8Q9BZ67 464 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ZCWPW1Q9H0M4 648 aa11.53□□□□□ -0.56
TOP3A-217ENST00000584582 ATP6AP2A0A1C7CYW4 349 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 TK2O00142 265 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 ITM2AO43736 263 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 TYROBPO43914 113 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 ATP6AP2O75787 350 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 STAMBPO95630 424 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-217ENST00000584582 EPHA3P29320 983 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 OR1E1P30953 314 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 CD86P42081 329 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 TWF1Q12792 350 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 PLEKHG4Q58EX7 1191 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 CST9Q5W186 159 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 C16orf59Q7L2K0 433 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 ZNF280BQ86YH2 543 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 FAM13CQ8NE31 585 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 SOCS4Q8WXH5 440 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 SIGLEC10Q96LC7 697 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 CATSPERBQ9H7T0 1116 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.56
TOP3A-217ENST00000584582 SRRM3A6NNA2 597 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-217ENST00000584582 DUSP11O75319 330 aaKnown RBP11.52□□□□□ -0.57
TOP3A-217ENST00000584582 PROCP04070 461 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 CCR10P46092 362 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 GATMP50440 423 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 MPP1Q00013 466 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 DUSP4Q13115 394 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 RNF43Q68DV7 783 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 ZNF280DQ6N043 979 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 TRIB2Q92519 343 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 FTHL17Q9BXU8 183 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 SLC24A3Q9HC58 644 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 CNGB3Q9NQW8 809 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 CDH9Q9ULB4 789 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 GREB1LQ9C091 1923 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-217ENST00000584582 FOCADQ5VW36 1801 aa11.52□□□□□ -0.57
TOP3A-217ENST00000584582 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 CBX4O00257 560 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 AOC2O75106 756 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 PRKCGP05129 697 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 C2P06681 752 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 HNRNPLP14866 589 aaKnown RBP eCLIP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 PAMP19021 973 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 CCND1P24385 295 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 NUDT2P50583 147 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 TBX4P57082 545 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 CDH17Q12864 832 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 FOXD4Q12950 439 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 ZBTB17Q13105 803 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 TSTA3Q13630 321 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 KIF19Q2TAC6 998 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 UBXN11Q5T124 520 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 ESRP1Q6NXG1 681 aaKnown RBP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 RPS27LQ71UM5 84 aaKnown RBP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 NAT14Q8WUY8 206 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 CATSPER2Q96P56 530 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 YIPF3Q9GZM5 350 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 TBKBP1A7MCY6 615 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 SUPT7LO94864 414 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 SPATA31D3P0C874 917 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 ALADP13716 330 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 ANKRD20A4Q4UJ75 823 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 EMC10Q5UCC4 262 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 SLC9A4Q6AI14 798 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 SPATA31D4Q6ZUB0 917 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 TAS2R42Q7RTR8 314 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 DDIASQ8IXT1 998 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 NPWQ8N729 165 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 ATP6V1E2Q96A05 226 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 TMLHEQ9NVH6 421 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 GGA2Q9UJY4 613 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 DERAQ9Y315 318 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 NEMP2A6NFY4 417 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 CHRNA1P02708 482 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 GFAPP14136 432 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 ELF1P32519 619 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 SREBF2Q12772 1141 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 LACTB2Q53H82 288 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-217ENST00000584582 MARC1Q5VT66 337 aa11.51□□□□□ -0.57
TOP3A-217ENST00000584582 KIAA0319Q5VV43 1072 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms