RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FIBINQ8TAL6 211 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 EPS8L1Q8TE68 723 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 GOLGA1Q92805 767 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 HSFY1Q96LI6 401 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 SERPINB11Q96P15 392 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 CDC6Q99741 560 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 TTYH3Q9C0H2 523 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 OSGEPQ9NPF4 335 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 CYTH4Q9UIA0 394 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 COL5A1P20908 1838 aaPredicted RBP16.16■□□□□ 0.18
SKA2-209ENST00000583976 RNASEH2AO75792 299 aaKnown RBP16.15■□□□□ 0.18
SKA2-209ENST00000583976 GALCP54803 685 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 ST8SIA6P61647 398 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 PPP2CBP62714 309 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 PPP2CAP67775 309 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 SMYD5Q6GMV2 418 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 PDZD3Q86UT5 571 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 CHSY1Q86X52 802 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 SCUBE3Q8IX30 993 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 APCDD1Q8J025 514 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 LGI2Q8N0V4 545 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 WDTC1Q8N5D0 677 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
SKA2-209ENST00000583976 CRELD1Q96HD1 420 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 RPL10LQ96L21 214 aaKnown RBP16.15■□□□□ 0.18
SKA2-209ENST00000583976 NEUROG2Q9H2A3 272 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 KIAA1522Q9P206 1035 aaPredicted RBP16.15■□□□□ 0.18
SKA2-209ENST00000583976 PCDHGC3Q9UN70 934 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 ERVW-1Q9UQF0 538 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 TLR6Q9Y2C9 796 aa16.15■□□□□ 0.18
SKA2-209ENST00000583976 A0A1W2PPC4 97 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 TYW5A2RUC4 315 aaKnown RBP16.14■□□□□ 0.17
SKA2-209ENST00000583976 E5RJQ4 531 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 PLK4O00444 970 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 PAPSS1O43252 624 aaPredicted RBP16.14■□□□□ 0.17
SKA2-209ENST00000583976 PCDHGA12O60330 932 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 FBXO21O94952 628 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 ASLP04424 464 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 FERP16591 822 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 ADPRHP54922 357 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 SHBQ15464 509 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 ASIC2Q16515 512 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 ZC3H12AQ5D1E8 599 aaKnown RBP16.14■□□□□ 0.17
SKA2-209ENST00000583976 FIGNQ5HY92 759 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 SFMBT2Q5VUG0 894 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 SPECC1LQ69YQ0 1117 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 USP30Q70CQ3 517 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 VSTM4Q8IW00 320 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 STK40Q8N2I9 435 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 ZNF397Q8NF99 534 aaPredicted RBP16.14■□□□□ 0.17
SKA2-209ENST00000583976 HNRNPLLQ8WVV9 542 aaKnown RBP16.14■□□□□ 0.17
SKA2-209ENST00000583976 ACE2Q9BYF1 805 aaPredicted RBP16.14■□□□□ 0.17
SKA2-209ENST00000583976 EDEM3Q9BZQ6 932 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 FTSJ1Q9UET6 329 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 SUN2Q9UH99 717 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 SLCO3A1Q9UIG8 710 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 NOCTQ9UK39 431 aaKnown RBP16.14■□□□□ 0.17
SKA2-209ENST00000583976 CEP83Q9Y592 693 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.14■□□□□ 0.17
SKA2-209ENST00000583976 ITIH6Q6UXX5 1313 aa16.14■□□□□ 0.17
SKA2-209ENST00000583976 A0A1B0GTQ1 180 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 C10orf142B7Z368 130 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 VILLO15195 856 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 TNFSF14O43557 240 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 IGLV3-25P01717 112 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 GYPCP04921 128 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 PDGFRAP16234 1089 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 CHRNB2P17787 502 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 TACR2P21452 398 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 MZF1P28698 734 aaPredicted RBP16.13■□□□□ 0.17
SKA2-209ENST00000583976 CASP14P31944 242 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 GGCXP38435 758 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 RPL34P49207 117 aaKnown RBP16.13■□□□□ 0.17
SKA2-209ENST00000583976 IRAK1P51617 712 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 C21orf59P57076 290 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 RACK1P63244 317 aaKnown RBP16.13■□□□□ 0.17
SKA2-209ENST00000583976 CDR2Q01850 454 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 CENPCQ03188 943 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 CYP4F3Q08477 520 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 NNTQ13423 1086 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 CAMK2BQ13554 666 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 ACAP1Q15027 740 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 TAF5Q15542 800 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 MEA1Q16626 185 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 E4F1Q66K89 784 aaPredicted RBP16.13■□□□□ 0.17
SKA2-209ENST00000583976 IRF2BP2Q7Z5L9 587 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 ZNF557Q8N988 423 aaPredicted RBP16.13■□□□□ 0.17
SKA2-209ENST00000583976 AZIN2Q96A70 460 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 AASDHPPTQ9NRN7 309 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 SEPT11Q9NVA2 429 aaKnown RBP16.13■□□□□ 0.17
SKA2-209ENST00000583976 MYO6Q9UM54 1294 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 CAPN11Q9UMQ6 739 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 NCKAP1Q9Y2A7 1128 aa16.13■□□□□ 0.17
SKA2-209ENST00000583976 LUC7L2Q9Y383 392 aaKnown RBP16.13■□□□□ 0.17
SKA2-209ENST00000583976 A0A1W2PQJ5 194 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 APOEP02649 317 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 CCDC172P0C7W6 258 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 SKILP12757 684 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms