RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 NCEH1Q6PIU2 408 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 BHLHA9Q7RTU4 235 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 FMNL3Q8IVF7 1028 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 ZC3H3Q8IXZ2 948 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 DEPDC4Q8N2C3 294 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 ANKRD52Q8NB46 1076 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 GANCQ8TET4 914 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 NDRG1Q92597 394 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 TTC17Q96AE7 1141 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 MYO19Q96H55 970 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 TMEM176AQ96HP8 235 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 FAXDC2Q96IV6 333 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 SLC6A18Q96N87 628 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 IMPG2Q9BZV3 1241 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 RSPH9Q9H1X1 276 aaPredicted RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 PABPC3Q9H361 631 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 MTG2Q9H4K7 406 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 ERVMER34-1Q9H9K5 563 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 UPF2Q9HAU5 1272 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 GDF3Q9NR23 364 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 AASDHPPTQ9NRN7 309 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 OLA1Q9NTK5 396 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 SFMBT1Q9UHJ3 866 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 GGA2Q9UJY4 613 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 FRMD4BQ9Y2L6 1034 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 HBS1LQ9Y450 684 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 PCDHGA11Q9Y5H2 935 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 PI4KAP42356 2102 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 URB1O60287 2271 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 MYO18AQ92614 2054 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 GOLGA6L7A0A1B0GV03 622 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 A0A1W2PP55 124 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TARSL2A2RTX5 802 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 LRRC72A6NJI9 287 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 J3QKU1 62 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TLR4O00206 839 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TULP2O00295 520 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 MAPK13O15264 365 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CALUO43852 315 aaPredicted RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 BRINP1O60477 761 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 SIN3BO75182 1162 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 RNASEH2AO75792 299 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 YEATS4O95619 227 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 GLDCP23378 1020 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 SLC8A1P32418 973 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CD70P32970 193 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 GCLMP48507 274 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CCR5P51681 352 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 SGSHP51688 502 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 RAD23BP54727 409 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 NXPH1P58417 271 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ST8SIA6P61647 398 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CXADRP78310 365 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 E2F1Q01094 437 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TLE3Q04726 772 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 PPP3CAQ08209 521 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 KCNJ12Q14500 433 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 HNRNPA1L2Q32P51 320 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 SLC45A4Q5BKX6 768 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 C9orf64Q5T6V5 341 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 PIK3R6Q5UE93 754 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ARHGAP17Q68EM7 881 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 PCSK4Q6UW60 755 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 INTS8Q75QN2 995 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 MMAAQ8IVH4 418 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 SPACA3Q8IXA5 215 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CEP57L1Q8IYX8 460 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CNPY4Q8N129 248 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TTC39CQ8N584 583 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ZNF557Q8N988 423 aaPredicted RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 KDM1BQ8NB78 822 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 SLC4A11Q8NBS3 891 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 KIAA0895Q8NCT3 520 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CCDC150Q8NCX0 1101 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 OR2T34Q8NGX1 318 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 FIBINQ8TAL6 211 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TAS1R2Q8TE23 839 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 RNF139Q8WU17 664 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 RFFLQ8WZ73 363 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 AZIN2Q96A70 460 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 WBP1Q96G27 269 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 INTS4Q96HW7 963 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 LMLNQ96KR4 655 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ZNF396Q96N95 335 aaPredicted RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 OMDQ99983 421 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ULBP1Q9BZM6 244 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 NIF3L1Q9GZT8 377 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 LRRC4Q9HBW1 653 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 CISHQ9NSE2 258 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ABCC13Q9NSE7 274 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 FAM13BQ9NYF5 915 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 SERGEFQ9UGK8 458 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ADAMTS1Q9UHI8 967 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TPX2Q9ULW0 747 aaKnown RBP5.53□□□□□ -1.52
VAPA-207ENST00000583879 CLCA2Q9UQC9 943 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 TRAF3IP3Q9Y228 551 aa5.53□□□□□ -1.52
VAPA-207ENST00000583879 ANKRD11Q6UB99 2663 aaPredicted RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 CEP192Q8TEP8 1941 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3DA0A087WVF3 549 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms