RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TAC4Q86UU9 113 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 TTC9BQ8N6N2 239 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.3□□□□□ -0.44
GGA3-217ENST00000583667 RNF139Q8WU17 664 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 EDEM1Q92611 657 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 FGF13Q92913 245 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 KXD1Q9BQD3 176 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 TXLNGYQ9BZA5 131 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 PLEKHA4Q9H4M7 779 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 PCDH9Q9HC56 1237 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 IGSF5Q9NSI5 407 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
GGA3-217ENST00000583667 GPATCH2LQ9NWQ4 482 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 OSER1Q9NX31 292 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 NDRG2Q9UN36 371 aaKnown RBP12.3□□□□□ -0.44
GGA3-217ENST00000583667 TLR6Q9Y2C9 796 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 SLC27A5Q9Y2P5 690 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 SNX24Q9Y343 169 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 LAMA1P25391 3075 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.29□□□□□ -0.44
GGA3-217ENST00000583667 HACD1B0YJ81 288 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 I6L893 689 aaPredicted RBP12.29□□□□□ -0.44
GGA3-217ENST00000583667 KRT14P02533 472 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 CSH1P0DML2 217 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 CSH2P0DML3 217 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 RBP3P10745 1247 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 PECAM1P16284 738 aaPredicted RBP12.29□□□□□ -0.44
GGA3-217ENST00000583667 ATF6P18850 670 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 HOXC13P31276 330 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 GPR15P49685 360 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 PGFP49763 221 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 EIF3EP60228 445 aaKnown RBP12.29□□□□□ -0.44
GGA3-217ENST00000583667 TAF10Q12962 218 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 PPP6R3Q5H9R7 873 aaPredicted RBP12.29□□□□□ -0.44
GGA3-217ENST00000583667 ALS2CLQ60I27 953 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 LILRA6Q6PI73 481 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 CEP68Q76N32 757 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 GRASPQ7Z6J2 395 aaPredicted RBP12.29□□□□□ -0.44
GGA3-217ENST00000583667 LONP2Q86WA8 852 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 DDX42Q86XP3 938 aaKnown RBP eCLIP12.29□□□□□ -0.44
GGA3-217ENST00000583667 LURAP1LQ8IV03 231 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 IQCKQ8N0W5 287 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 LRRC45Q96CN5 670 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 HAUS1Q96CS2 278 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 SNF8Q96H20 258 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 LMAN1LQ9HAT1 526 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 USP29Q9HBJ7 922 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 ANLNQ9NQW6 1124 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 ARHGEF4Q9NR80 690 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 FREM2Q5SZK8 3169 aa12.29□□□□□ -0.44
GGA3-217ENST00000583667 DCLK1O15075 740 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 PPFIA2O75334 1257 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 SASH3O75995 380 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 SEC24AO95486 1093 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 IGLV3-27P01718 113 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 RARGP13631 454 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 HMGA1P17096 107 aaKnown RBP12.28□□□□□ -0.44
GGA3-217ENST00000583667 GOT1P17174 413 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 TUBP50607 506 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 CDR1P51861 262 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 MLLT6P55198 1093 aaPredicted RBP12.28□□□□□ -0.44
GGA3-217ENST00000583667 NTHL1P78549 312 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 ZNF33AQ06730 810 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 GAS6Q14393 721 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
GGA3-217ENST00000583667 TRIP4Q15650 581 aaPredicted RBP12.28□□□□□ -0.44
GGA3-217ENST00000583667 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 PLA2G2CQ5R387 149 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 ARTNQ5T4W7 220 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 MANEALQ5VSG8 457 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 RNF43Q68DV7 783 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 CEP128Q6ZU80 1094 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 RFX8Q6ZV50 586 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 PDZD4Q76G19 769 aaPredicted RBP12.28□□□□□ -0.44
GGA3-217ENST00000583667 PCGF5Q86SE9 256 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 TADA2BQ86TJ2 420 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 RELL1Q8IUW5 271 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 FBXO32Q969P5 355 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 OLFM3Q96PB7 478 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 FMO2Q99518 471 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 SEPT5Q99719 369 aaPredicted RBP12.28□□□□□ -0.44
GGA3-217ENST00000583667 EPAS1Q99814 870 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 PHACTR1Q9C0D0 580 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 TKTL2Q9H0I9 626 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 NEUROG2Q9H2A3 272 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 DPH5Q9H2P9 285 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 SMOC1Q9H4F8 434 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 RETREG1Q9H6L5 497 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 CACNA2D2Q9NY47 1150 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 GMIPQ9P107 970 aa12.28□□□□□ -0.44
GGA3-217ENST00000583667 SAE1Q9UBE0 346 aaPredicted RBP12.28□□□□□ -0.44
GGA3-217ENST00000583667 MTRF1LQ9UGC7 380 aaKnown RBP12.28□□□□□ -0.44
GGA3-217ENST00000583667 FAM153AQ9UHL3 310 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms