RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 HOXD13P35453 343 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 UGT1A5P35504 534 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 UBA7P41226 1012 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 CSKP41240 450 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 CTSOP43234 321 aaPredicted RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 NDST1P52848 882 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 KCNAB2Q13303 367 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF542PQ5EBM4 170 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 MANEAQ5SRI9 462 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ARL6IP4Q66PJ3 421 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ZCCHC8Q6NZY4 707 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 TICAM1Q8IUC6 712 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 RDH13Q8NBN7 331 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 OR13H1Q8NG92 308 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 PTPRN2Q92932 1015 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 PLD4Q96BZ4 506 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 TMA16Q96EY4 203 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 TWNKQ96RR1 684 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 SLC12A9Q9BXP2 914 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF768Q9H5H4 540 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 PNPLA8Q9NP80 782 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 OLFML3Q9NRN5 406 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 SLCO3A1Q9UIG8 710 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ANAPC2Q9UJX6 822 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ERVW-1Q9UQF0 538 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ADGRG1Q9Y653 693 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ITIH6Q6UXX5 1313 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 ADGRG4Q8IZF6 3080 aa7.96□□□□□ -1.14
SMARCE1-217ENST00000580654 MED13Q9UHV7 2174 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 F8P00451 2351 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 FRMD3A2A2Y4 597 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 NTN3O00634 580 aaPredicted RBP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 KIAA0391O15091 583 aaKnown RBP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 VAV1P15498 845 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 GAP43P17677 238 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 COL8A1P27658 744 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 TNFRSF8P28908 595 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 SLC6A4P31645 630 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 ATICP31939 592 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 NUDT1P36639 197 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 UQCRFS1P47985 274 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 POLE2P56282 527 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 TAS2R38P59533 333 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 CYP24A1Q07973 514 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 PSMD6Q15008 389 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 AGBL4Q5VU57 503 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 MMS22LQ6ZRQ5 1243 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 CENPQQ7L2Z9 268 aaPredicted RBP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 BHLHA9Q7RTU4 235 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 ZFAND4Q86XD8 727 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 DTX1Q86Y01 620 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 JAMLQ86YT9 394 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 FBXO39Q8N4B4 442 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 KDM1BQ8NB78 822 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF548Q8NEK5 533 aaPredicted RBP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 PLEKHO2Q8TD55 490 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 SYAP1Q96A49 352 aaPredicted RBP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 CCDC127Q96BQ5 260 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 MYEOVQ96EZ4 313 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 CDK5RAP1Q96SZ6 601 aaKnown RBP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 LLPHQ9BRT6 129 aaKnown RBP7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 DUSP23Q9BVJ7 150 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 CALN1Q9BXU9 219 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 KDM4CQ9H3R0 1056 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 FZD3Q9NPG1 666 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 KLF15Q9UIH9 416 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 SARDHQ9UL12 918 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 UBE4BO95155 1302 aa7.95□□□□□ -1.14
SMARCE1-217ENST00000580654 PDZD2O15018 2839 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 SDK2Q58EX2 2172 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 EDDM13A0A1B0GTR0 161 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 GOLGA6L7A0A1B0GV03 622 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 NEMP2A6NFY4 417 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 SLC31A1O15431 190 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 MTSS1O43312 755 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 TBL1XO60907 577 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 RNGTTO60942 597 aaKnown RBP7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 VNN1O95497 513 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 IL1BP01584 269 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 PRLRP16471 622 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 CASP4P49662 377 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 CLDN2P57739 230 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 ANAPC15P60006 121 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 ST8SIA6P61647 398 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 CNTN1Q12860 1018 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 TRPC3Q13507 836 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 SNRNP35Q16560 246 aaKnown RBP7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 SETMARQ53H47 684 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 RILPL1Q5EBL4 403 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 FSCBQ5H9T9 825 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF667Q5HYK9 610 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 ADGRF1Q5T601 910 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 PIK3R6Q5UE93 754 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 RFWD3Q6PCD5 774 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 BORAQ6PGQ7 559 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 GCNT7Q6ZNI0 430 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 RSRC2Q7L4I2 434 aaKnown RBP7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 RAB11FIP2Q7L804 512 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 TPCN2Q8NHX9 752 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms