RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 RASSF8Q8NHQ8 419 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 PTPRN2Q92932 1015 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 PMEPA1Q969W9 287 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 TTC17Q96AE7 1141 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 STRADBQ9C0K7 418 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 STRIP2Q9ULQ0 834 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 CEP83Q9Y592 693 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 PCDHA5Q9Y5H7 936 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 MED13Q9UHV7 2174 aa14.55□□□□□ -0.08
CSNK1D-213ENST00000580446 RP1P56715 2156 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 A0A1B0GTL3 188 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 RPLP0P05388 317 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 SLC6A4P31645 630 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 HNRNPKP61978 463 aaKnown RBP eCLIP14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 KLRB1Q12918 225 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 TRIP4Q15650 581 aaPredicted RBP14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 FSCBQ5H9T9 825 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 NUGGCQ68CJ6 796 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 CCDC186Q7Z3E2 898 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 MFN1Q8IWA4 741 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 CARNMT1Q8N4J0 409 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 FBXO18Q8NFZ0 1043 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 CCDC74AQ96AQ1 378 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 PLD4Q96BZ4 506 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 GFM1Q96RP9 751 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 TWNKQ96RR1 684 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 IL12RB2Q99665 862 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 SIRPGQ9P1W8 387 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 SFMBT1Q9UHJ3 866 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 APCP25054 2843 aa14.54□□□□□ -0.08
CSNK1D-213ENST00000580446 DOCK9Q9BZ29 2069 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 A0A1W2PQM1 296 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 TARSL2A2RTX5 802 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 GCATO75600 419 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 CD2BP2O95400 341 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 CELA2BP08218 269 aaPredicted RBP14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 ZNF284Q2VY69 593 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 PITRM1Q5JRX3 1037 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 ATP1A1-AS1Q5TC04 95 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 SEL1L3Q68CR1 1132 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 SV2AQ7L0J3 742 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 HEATR4Q86WZ0 1026 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 CALML4Q96GE6 196 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 POM121Q96HA1 1249 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 PRICKLE1Q96MT3 831 aaPredicted RBP14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 CPEB1Q9BZB8 566 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 CLIC5Q9NZA1 410 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 GULP1Q9UBP9 304 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 TPX2Q9ULW0 747 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 PADI4Q9UM07 663 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 DNHD1Q96M86 4753 aa14.53□□□□□ -0.08
CSNK1D-213ENST00000580446 POM121BA6NF01 834 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 PHACTR2O75167 634 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 CSF2P04141 144 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 FAM163BP0C2L3 166 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 NME1P15531 152 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 JUNDP17535 347 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 AKT2P31751 481 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 CASP4P49662 377 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 ADKP55263 362 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 YWHAGP61981 247 aaKnown RBP eCLIP14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 RPS24P62847 133 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 EIF3IQ13347 325 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 EIF2S3LQ2VIR3 472 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 DEFB109BQ30KR1 87 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 ZNF699Q32M78 642 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 KMT5BQ4FZB7 885 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 APCDD1Q8J025 514 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 EDEM1Q92611 657 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 LARP4BQ92615 738 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 BOCQ9BWV1 1114 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 SALL4Q9UJQ4 1053 aa14.52□□□□□ -0.09
CSNK1D-213ENST00000580446 SPINT1O43278 529 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 BNIP3LO60238 219 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 NUDT1P36639 197 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 UBA7P41226 1012 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 PSEN1P49768 467 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 MRPL49Q13405 166 aaKnown RBP14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 ADGRF1Q5T601 910 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 KCTD17Q8N5Z5 321 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 EFCAB3Q8N7B9 438 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 Q8N9G6 341 aaPredicted RBP14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 TEX19Q8NA77 164 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 KYQ8NBH2 561 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 NKD1Q969G9 470 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 FAM131CQ96AQ9 280 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 MOCOSQ96EN8 888 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 TCTN2Q96GX1 697 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 SLC4A5Q9BY07 1137 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 NCKIPSDQ9NZQ3 722 aa14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 ZFR2Q9UPR6 939 aaKnown RBP14.51□□□□□ -0.09
CSNK1D-213ENST00000580446 A0A1W2PQ27 194 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 A0A1W2PQ64 194 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 A0A1W2PQC6 194 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 ARHGAP10A1A4S6 786 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 RNF103O00237 685 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 RAD51BO15315 384 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 ASLP04424 464 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms