RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 UBE2TQ9NPD8 197 aaPredicted RBP18.45■□□□□ 0.54
MKS1-209ENST00000580127 PLXNA2O75051 1894 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 ALOX15BO15296 676 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 THAP12O43422 761 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 RNGTTO60942 597 aaKnown RBP18.44■□□□□ 0.54
MKS1-209ENST00000580127 AFPP02771 609 aaKnown RBP18.44■□□□□ 0.54
MKS1-209ENST00000580127 GLI1P08151 1106 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 PDGFRAP16234 1089 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 CKMT2P17540 419 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 EPHA8P29322 1005 aaPredicted RBP18.44■□□□□ 0.54
MKS1-209ENST00000580127 E2F1Q01094 437 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 SETMARQ53H47 684 aaPredicted RBP18.44■□□□□ 0.54
MKS1-209ENST00000580127 DENND1BQ6P3S1 775 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 CACTIN-AS1Q8N1I8 211 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 NELFBQ8WX92 580 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 ERCC4Q92889 916 aaPredicted RBP18.44■□□□□ 0.54
MKS1-209ENST00000580127 MYEOVQ96EZ4 313 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 IGSF10Q6WRI0 2623 aa18.44■□□□□ 0.54
MKS1-209ENST00000580127 TP53BP1Q12888 1972 aaPredicted RBP18.44■□□□□ 0.54
MKS1-209ENST00000580127 WDFY3Q8IZQ1 3526 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 PRAMEF26H0Y7S4 382 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 SEMG2Q02383 582 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 TARDBPQ13148 414 aaKnown RBP eCLIP18.43■□□□□ 0.54
MKS1-209ENST00000580127 DNAJC3Q13217 504 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 ARHGEF19Q8IW93 802 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 CCDC114Q96M63 670 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 RPRD1AQ96P16 312 aaPredicted RBP18.43■□□□□ 0.54
MKS1-209ENST00000580127 UBL7Q96S82 380 aaPredicted RBP18.43■□□□□ 0.54
MKS1-209ENST00000580127 INTS2Q9H0H0 1204 aaKnown RBP18.43■□□□□ 0.54
MKS1-209ENST00000580127 TMEM51Q9NW97 253 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 DDIT4Q9NX09 232 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 CYTH4Q9UIA0 394 aa18.43■□□□□ 0.54
MKS1-209ENST00000580127 E5RJQ4 531 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 MCF2LO15068 1137 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 CALCAP01258 141 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 GNA15P30679 374 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 USP8P40818 1118 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 ACADVLP49748 655 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 STK19P49842 368 aaPredicted RBP18.42■□□□□ 0.54
MKS1-209ENST00000580127 KRT83P78385 493 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 SHBQ15464 509 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 TTI2Q6NXR4 508 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 TRIM69Q86WT6 500 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 TSC1Q92574 1164 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 KLHDC7BQ96G42 594 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 FEM1AQ9BSK4 669 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 ASNSD1Q9NWL6 643 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 XPO7Q9UIA9 1087 aaKnown RBP18.42■□□□□ 0.54
MKS1-209ENST00000580127 SHROOM3Q8TF72 1996 aa18.42■□□□□ 0.54
MKS1-209ENST00000580127 TK2O00142 265 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 PLRG1O43660 514 aaKnown RBP18.41■□□□□ 0.54
MKS1-209ENST00000580127 ATP9BO43861 1147 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 HSF2BPO75031 334 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 RTN2O75298 545 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 CLDN11O75508 207 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 IGLV3-25P01717 112 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 BNIP3Q12983 259 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 RTP5Q14D33 572 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 DLG2Q15700 870 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 HES3Q5TGS1 186 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 SMYD5Q6GMV2 418 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 NEK5Q6P3R8 708 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 TRIM59Q8IWR1 403 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 FRS2Q8WU20 508 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 KREMEN1Q96MU8 473 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 SRRTQ9BXP5 876 aaKnown RBP18.41■□□□□ 0.54
MKS1-209ENST00000580127 PREBQ9HCU5 417 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 DYRK4Q9NR20 520 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 VPS28Q9UK41 221 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 MAN1B1Q9UKM7 699 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 PPM1HQ9ULR3 514 aa18.41■□□□□ 0.54
MKS1-209ENST00000580127 SYNJ2BP-COX16A0A087WUM0 186 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 WNT9AO14904 365 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 CD44P16070 742 aaKnown RBP18.4■□□□□ 0.54
MKS1-209ENST00000580127 MAT2AP31153 395 aaKnown RBP18.4■□□□□ 0.54
MKS1-209ENST00000580127 DRD3P35462 400 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 ACTN2P35609 894 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 EIF2S3P41091 472 aaKnown RBP18.4■□□□□ 0.54
MKS1-209ENST00000580127 MARSP56192 900 aaKnown RBP18.4■□□□□ 0.54
MKS1-209ENST00000580127 C19orf57Q0VDD7 668 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 ZNF211Q13398 564 aaPredicted RBP18.4■□□□□ 0.54
MKS1-209ENST00000580127 FBXL22Q6P050 247 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 FBXL19Q6PCT2 694 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 DEFB106AQ8N104 65 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 PIP4K2CQ8TBX8 421 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 FGF11Q92914 225 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 PPP1R13BQ96KQ4 1090 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 PRMT1Q99873 361 aaKnown RBP18.4■□□□□ 0.54
MKS1-209ENST00000580127 MUC3BQ9H195 1237 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 EVA1BQ9NVM1 165 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 COX16Q9P0S2 106 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 PAXBP1Q9Y5B6 917 aa18.4■□□□□ 0.54
MKS1-209ENST00000580127 C10orf142B7Z368 130 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 PPP1R3GB7ZBB8 358 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 CBX4O00257 560 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 GLDCP23378 1020 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 PPP2CBP62714 309 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 PPP2CAP67775 309 aa18.39■□□□□ 0.53
MKS1-209ENST00000580127 DAB2P98082 770 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms