RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ABCG1P45844 678 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 SNX16P57768 344 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 IL9RQ01113 521 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 CYP4F3Q08477 520 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 ILKQ13418 452 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 EXOC3L4Q17RC7 722 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 C9orf64Q5T6V5 341 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 NAPEPLDQ6IQ20 393 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 DHRS13Q6UX07 377 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 PRPF39Q86UA1 669 aaKnown RBP13.79□□□□□ -0.2
TRAF4-214ENST00000580073 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 CLEC4CQ8WTT0 213 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 RNF34Q969K3 372 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 SLC39A13Q96H72 371 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 SERAC1Q96JX3 654 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 LMLNQ96KR4 655 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 MRGPRX3Q96LB0 322 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 CCDC114Q96M63 670 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 ZSWIM1Q9BR11 485 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 ORAI3Q9BRQ5 295 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 UBE2TQ9NPD8 197 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-214ENST00000580073 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
TRAF4-214ENST00000580073 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAF4-214ENST00000580073 DMTF1Q9Y222 760 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 SIK3Q9Y2K2 1263 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 DOCK9Q9BZ29 2069 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 KNTC1P50748 2209 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 DOCK4Q8N1I0 1966 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 A0A087WV48 116 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 TRABD2BA6NFA1 517 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 LGALS16A8MUM7 142 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 BECN2A8MW95 431 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 ALOX15BO15296 676 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 IL1BP01584 269 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 CDK11BP21127 795 aaKnown RBP13.78□□□□□ -0.2
TRAF4-214ENST00000580073 TACR2P21452 398 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 EPHA8P29322 1005 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-214ENST00000580073 RPL34P49207 117 aaKnown RBP13.78□□□□□ -0.2
TRAF4-214ENST00000580073 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 RAP1GAP2Q684P5 730 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 SMYD5Q6GMV2 418 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 LRRC69Q6ZNQ3 347 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 IQCHQ86VS3 1027 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 RNF214Q8ND24 703 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 OR14C36Q8NHC7 312 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 HNRNPLLQ8WVV9 542 aaKnown RBP13.78□□□□□ -0.2
TRAF4-214ENST00000580073 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 BAP1Q92560 729 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 NOX5Q96PH1 765 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 NAA15Q9BXJ9 866 aaKnown RBP13.78□□□□□ -0.2
TRAF4-214ENST00000580073 NEUROG2Q9H2A3 272 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 GANQ9H2C0 597 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 FAM204AQ9H8W3 233 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 SERGEFQ9UGK8 458 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 INTS6Q9UL03 887 aaKnown RBP13.78□□□□□ -0.2
TRAF4-214ENST00000580073 SLCO1B1Q9Y6L6 691 aa13.78□□□□□ -0.2
TRAF4-214ENST00000580073 TDRD6O60522 2096 aaKnown RBP13.78□□□□□ -0.2
TRAF4-214ENST00000580073 PES1O00541 588 aaKnown RBP13.77□□□□□ -0.21
TRAF4-214ENST00000580073 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.21
TRAF4-214ENST00000580073 GLI1P08151 1106 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 PNMA6AP0CW24 399 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-214ENST00000580073 JUPP14923 745 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 GNA15P30679 374 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 CCR1P32246 355 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 GPD2P43304 727 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-214ENST00000580073 YWHAZP63104 245 aaKnown RBP13.77□□□□□ -0.21
TRAF4-214ENST00000580073 FANCCQ00597 558 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 CAMK2BQ13554 666 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 SETMARQ53H47 684 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-214ENST00000580073 KLHDC7AQ5VTJ3 777 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 CFAP52Q8N1V2 620 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 SAP25Q8TEE9 199 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 RBSNQ9H1K0 784 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 MTG2Q9H4K7 406 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 ACP6Q9NPH0 428 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 TMEM51Q9NW97 253 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 APEX2Q9UBZ4 518 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 DNAJC12Q9UKB3 198 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 CNTN6Q9UQ52 1028 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 NAALADL1Q9UQQ1 740 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-214ENST00000580073 FHOD1Q9Y613 1164 aa13.77□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3DA0A087WVF3 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3IA0A087WXS9 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3EA0A087X179 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3KA0A087X1G2 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 A0A1B0GTH6 734 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3FA6NER0 549 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TTC34A8MYJ7 566 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 KCNU1A8MYU2 1149 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3LB9A6J9 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TLR4O00206 839 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 KCNK3O14649 394 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 RRP8O43159 456 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms