RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 FBXO21O94952 628 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 LCP1P13796 627 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RBMS1P29558 406 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MAT2AP31153 395 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 OXCT1P55809 520 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NUCB2P80303 420 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ATL3Q6DD88 541 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NADSYN1Q6IA69 706 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FAM174AQ8TBP5 190 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SEMA4DQ92854 862 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 IFT43Q96FT9 208 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PAGE5Q96GU1 130 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RPL10LQ96L21 214 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PRICKLE1Q96MT3 831 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SEMA4CQ9C0C4 833 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PREBQ9HCU5 417 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ASCL3Q9NQ33 180 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NLGN3Q9NZ94 848 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NCKIPSDQ9NZQ3 722 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SERTAD1Q9UHV2 236 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PCDHA7Q9UN72 937 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DOPEY2Q9Y3R5 2298 aa12.6□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CENPEQ02224 2701 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 A0A1B0GVM2 712 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 K7ENP7 123 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 O00370 1275 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ALOX15BO15296 676 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SART1O43290 800 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 LZTS3O60299 673 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RTN2O75298 545 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 THEGLP0DJG4 465 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CTSOP43234 321 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CSRP3P50461 194 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 KCNMA1Q12791 1236 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 CUL2Q13617 745 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 STILQ15468 1287 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FSCBQ5H9T9 825 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NEK5Q6P3R8 708 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 INO80CQ6PI98 192 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 LCLAT1Q6UWP7 414 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 XKR5Q6UX68 686 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TMC6Q7Z403 805 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 GUF1Q8N442 669 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 UBA3Q8TBC4 463 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 VCPIP1Q96JH7 1222 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FCRL2Q96LA5 508 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 HSFY1Q96LI6 401 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RHOBTB3O94955 611 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 APOEP02649 317 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TBXAS1P24557 533 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TTC39BQ5VTQ0 682 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 AGBL4Q5VU57 503 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CCDC81Q6ZN84 652 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 DCP2Q8IU60 420 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TMEM145Q8NBT3 493 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TPCN2Q8NHX9 752 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MAPK15Q8TD08 544 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC35F5Q8WV83 523 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SPOCK2Q92563 424 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ERCC4Q92889 916 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC39A13Q96H72 371 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 APOLD1Q96LR9 279 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SRRTQ9BXP5 876 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 NUCKS1Q9H1E3 243 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CFAP45Q9UL16 551 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 COQ4Q9Y3A0 265 aa12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 HEMK1Q9Y5R4 338 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RP1L1Q8IWN7 2480 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CYSRT1A8MQ03 144 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MCF2LO15068 1137 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SCAMP1O15126 338 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 FFAR2O15552 330 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PIAS2O75928 621 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PAEPP09466 180 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZNF18P17022 549 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 AKT2P31751 481 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RGS7P49802 495 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 STK19P49842 368 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PLK1P53350 603 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SKOR1P84550 965 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CNTN1Q12860 1018 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CNGA2Q16280 664 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 EDRF1Q3B7T1 1238 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PMF1Q6P1K2 205 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 BEND5Q7L4P6 421 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 APCDD1Q8J025 514 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 LGI2Q8N0V4 545 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CFAP52Q8N1V2 620 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ARL14Q8N4G2 192 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms