RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CELF5Q8N6W0 485 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 ZSCAN18Q8TBC5 510 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 SH3RF2Q8TEC5 729 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 MAIP1Q8WWC4 291 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 OTUB2Q96DC9 234 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CSPG4P5Q96PW8 444 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PSMB7Q99436 277 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 MAK16Q9BXY0 300 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 MAGEB5Q9BZ81 275 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 SLITRK6Q9H5Y7 841 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 RUBCNLQ9H714 662 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 UBE2ZQ9H832 354 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 BRD7Q9NPI1 651 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 SMPD4Q9NXE4 827 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CD207Q9UJ71 328 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 LSM7Q9UK45 103 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 PCDHGB7Q9Y5F8 929 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 MRFAP1Q9Y605 127 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 hCG_1818297A0A087WSY0 165 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 WASH4PA8MWX3 477 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 E9PAM4 449 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PI4K2BG5E9Z4 385 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 H3BRJ5 948 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 EREGO14944 169 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 ZNF185O15231 689 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 LAMP2P13473 410 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 FOSL2P15408 326 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 ZFXP17010 805 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 CHKAP35790 457 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PAFAH1B1P43034 410 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 DNA2P51530 1060 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 RACK1P63244 317 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 ZNF77Q15935 545 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 FAM133BQ5BKY9 247 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 ANKRD20A8PQ5CZ79 823 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PPP6R3Q5H9R7 873 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 FAM78AQ5JUQ0 283 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 DNTTIP2Q5QJE6 756 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 MPP7Q5T2T1 576 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 ZFYVE27Q5T4F4 411 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 SEL1L2Q5TEA6 688 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 SAMD5Q5TGI4 173 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 SLC9A4Q6AI14 798 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 NXPE4Q6UWF7 544 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 LRRC31Q6UY01 552 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 RFX8Q6ZV50 586 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 BBS12Q6ZW61 710 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 OTOP3Q7RTS5 596 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 ZNF572Q7Z3I7 529 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 ANKS1BQ7Z6G8 1248 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 NLRP8Q86W28 1048 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 DENND1CQ8IV53 801 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PYROXD2Q8N2H3 581 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PCDH19Q8TAB3 1148 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 WBP2Q969T9 261 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 ACSF2Q96CM8 615 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 APOL5Q9BWW9 433 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CALN1Q9BXU9 219 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 FRMD8P1Q9BZ68 369 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 SIK2Q9H0K1 926 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 HOMER3Q9NSC5 361 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 GPATCH2LQ9NWQ4 482 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CFAP97Q9P2B7 532 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 TBC1D14Q9P2M4 693 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 EPS15L1Q9UBC2 864 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 XPO7Q9UIA9 1087 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 CCL26Q9Y258 94 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 SH3BP1Q9Y3L3 701 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PLXNA3P51805 1871 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 C5orf42Q9H799 3197 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 PGRMC1O00264 195 aaKnown RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 EEF2KO00418 725 aaKnown RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 SLC9A3R1O14745 358 aaPredicted RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 FGF10O15520 208 aaPredicted RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 PRAMEF12O95522 483 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 MOCS2O96007 188 aaPredicted RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 FGGP02679 453 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 HMBSP08397 361 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 GOT1P17174 413 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 EPHB2P29323 1055 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 NR2C2P49116 596 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 SMAD4Q13485 552 aaKnown RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 DPYSQ14117 519 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 PAFAH1B3Q15102 231 aaKnown RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 RNF43Q68DV7 783 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 NADSYN1Q6IA69 706 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 FBXL22Q6P050 247 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 AADACL2Q6P093 401 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 C14orf80Q86SX3 495 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 CCDC50Q8IVM0 306 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 ADGRG2Q8IZP9 1017 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 LZTR1Q8N653 840 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 PQLC3Q8N755 202 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 PLD5Q8N7P1 536 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 ING5Q8WYH8 240 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 MS4A14Q96JA4 679 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 RPGRIP1Q96KN7 1286 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 LRRC3BQ96PB8 259 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms