RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 PLD5Q8N7P1 536 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 SHKBP1Q8TBC3 707 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 CASKIN2Q8WXE0 1202 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 MYEOVQ96EZ4 313 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
CRLF3-202ENST00000577725 PARD6BQ9BYG5 372 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 TRIM31Q9BZY9 425 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 SMG9Q9H0W8 520 aaKnown RBP10.36□□□□□ -0.75
CRLF3-202ENST00000577725 DPH5Q9H2P9 285 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 ATXN3LQ9H3M9 355 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 SLITRK6Q9H5Y7 841 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 LRRC19Q9H756 370 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 ASAH2Q9NR71 780 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 DNMT3BQ9UBC3 853 aaKnown RBP10.36□□□□□ -0.75
CRLF3-202ENST00000577725 OR12D3Q9UGF7 316 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 HEY1Q9Y5J3 304 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 IGSF10Q6WRI0 2623 aa10.36□□□□□ -0.75
CRLF3-202ENST00000577725 NUP205Q92621 2012 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 H7C0C1 242 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 APOC4-APOC2K7ER74 178 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 TRDMT1O14717 391 aaKnown RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 DCLK1O15075 740 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 MOSPD3O75425 235 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 IGLV3-27P01718 113 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 APOC2P02655 101 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 RHOP08100 348 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ZNF806P0C7X5 589 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ETS1P14921 441 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ERCC2P18074 760 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CD72P21854 359 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CNR2P34972 360 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ATP5OP48047 213 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 FNTAP49354 379 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 VPS41P49754 854 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 AIF1P55008 147 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 EIF3EP60228 445 aaKnown RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 SLC10A2Q12908 348 aaPredicted RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 NNTQ13423 1086 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 TEAD2Q15562 447 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CCNG2Q16589 344 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 SLC5A9Q2M3M2 681 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 COL28A1Q2UY09 1125 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 MS4A13Q5J8X5 152 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ARTNQ5T4W7 220 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CCDC70Q6NSX1 233 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 GRASPQ7Z6J2 395 aaPredicted RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 TADA2BQ86TJ2 420 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ZC3H18Q86VM9 953 aaKnown RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CHSY1Q86X52 802 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CIR1Q86X95 450 aaPredicted RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 PROSER1Q86XN7 944 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 DDX42Q86XP3 938 aaKnown RBP eCLIP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 MAB21L3Q8N8X9 362 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ATP6V0D2Q8N8Y2 350 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CCDC26Q8TAB7 109 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ING5Q8WYH8 240 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 MRPS31Q92665 395 aaKnown RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 ZNF707Q96C28 371 aaPredicted RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 TBC1D31Q96DN5 1066 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 GCNAQ96QF7 691 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 HAPLN3Q96S86 360 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CDK5RAP1Q96SZ6 601 aaKnown RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 EPAS1Q99814 870 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 OSBPL2Q9H1P3 480 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 MPP6Q9NZW5 540 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 VANGL2Q9ULK5 521 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 NEU3Q9UQ49 428 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 EFR3BQ9Y2G0 817 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 HBS1LQ9Y450 684 aaKnown RBP10.35□□□□□ -0.75
CRLF3-202ENST00000577725 NEUROG3Q9Y4Z2 214 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 CPQQ9Y646 472 aa10.35□□□□□ -0.75
CRLF3-202ENST00000577725 C2orf16Q68DN1 1984 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 SHROOM3Q8TF72 1996 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 CCDC195A0A1B0GUA6 201 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 FAM187AA6NFU0 413 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 ZNF487B1APH4 448 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 E9PAM4 449 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 GIPC1O14908 333 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 MCF2LO15068 1137 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 STC2O76061 302 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 ZSCAN5DPP0CG00 497 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 SLC2A3P11169 496 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 CEBPBP17676 345 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 HDCP19113 662 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 TACR2P21452 398 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 TGM2P21980 687 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 TARSP26639 723 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 EPHB2P29323 1055 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 CDC25CP30307 473 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 CORO1AP31146 461 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 PPP3CCP48454 512 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 TUBP50607 506 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 PFKPQ01813 784 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 BYSLQ13895 437 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 NOMO1Q15155 1222 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 PPP1R7Q15435 360 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 OASLQ15646 514 aaKnown RBP10.34□□□□□ -0.75
CRLF3-202ENST00000577725 GPR158Q5T848 1215 aa10.34□□□□□ -0.75
CRLF3-202ENST00000577725 MANEALQ5VSG8 457 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms