RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ZWILCHQ9H900 591 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 POLR3BQ9NW08 1133 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NEU3Q9UQ49 428 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ERVW-1Q9UQF0 538 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PCDHA13Q9Y5I0 950 aa13.04□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PLXND1Q9Y4D7 1925 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 VPS13AQ96RL7 3174 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 A0A0A6YYK5 440 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 EDDM13A0A1B0GTR0 161 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 A0A1W2PQF6 199 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 WASH4PA8MWX3 477 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 H3BRJ5 948 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 DAPK3O43293 454 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 NRDCO43847 1150 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 LILRB5O75023 590 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 KRT7P08729 469 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GEMIN4P57678 1058 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 GNA12Q03113 381 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SMTNL2Q2TAL5 461 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HNRNPA1L2Q32P51 320 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 USP39Q53GS9 565 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PPP6R3Q5H9R7 873 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ARTNQ5T4W7 220 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RETSATQ6NUM9 610 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CYP4V2Q6ZWL3 525 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 PGBD3Q8N328 593 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CCDC112Q8NEF3 446 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ALG14Q96F25 216 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 SPACA7Q96KW9 195 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CALR3Q96L12 384 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 KCTD15Q96SI1 283 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 MAGEH1Q9H213 219 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 ATP13A1Q9HD20 1204 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 OSGEPQ9NPF4 335 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 FAM86C1Q9NVL1 165 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 HPCAL4Q9UM19 191 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 OR51B4Q9Y5P0 310 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 R4GN57 208 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 WDR87Q6ZQQ6 2873 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 EML5Q05BV3 1969 aa13.03□□□□□ -0.32
CDK5RAP3-203ENST00000577442 CXorf51AA0A1B0GTR3 108 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 TARSL2A2RTX5 802 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 WASH3PC4AMC7 463 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RARAP10276 462 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 HLA-EP13747 358 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 GABRG2P18507 467 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 IL1R2P27930 398 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SLC1A1P43005 524 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CTSOP43234 321 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 HCAR3P49019 387 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PXNP49023 591 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CLCN6P51797 869 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 HADHBP55084 474 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SLC20A2Q08357 652 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DMWDQ09019 674 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CAMK2GQ13555 558 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KRT81Q14533 505 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MESDQ14696 234 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 POLD3Q15054 466 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CA9Q16790 459 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PARP15Q460N3 678 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DAB2IPQ5VWQ8 1189 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KIAA1211LQ6NV74 962 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RAD9BQ6WBX8 426 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RFX8Q6ZV50 586 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 POLNQ7Z5Q5 900 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ABCA7Q8IZY2 2146 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 OR7D4Q8NG98 312 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 OR52K2Q8NGK3 314 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 OR2T3Q8NH03 318 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 GAB3Q8WWW8 586 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 HSPH1Q92598 858 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ANP32BQ92688 251 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MRGPRX3Q96LB0 322 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SPON2Q9BUD6 331 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MAGEB5Q9BZ81 275 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CD248Q9HCU0 757 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 VPS51Q9UID3 782 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 HS3ST2Q9Y278 367 aa13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 NYNRINQ9P2P1 1898 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-203ENST00000577442 A0A0D9SEW6 157 aa13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ZSCAN5CA6NGD5 496 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PROB1E7EW31 1015 aa13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CBX4O00257 560 aa13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ATP9BO43861 1147 aa13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SNAP91O60641 907 aa13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ZNF217O75362 1048 aa13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RPP40O75818 363 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-203ENST00000577442 TCF4P15884 667 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms