RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CCDC183Q5T5S1 534 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 NCEH1Q6PIU2 408 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 LINGO4Q6UY18 593 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 Q6ZVU0 165 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 ZDHHC17Q8IUH5 632 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 ZNF557Q8N988 423 aaPredicted RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 PGAP3Q96FM1 320 aaPredicted RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 PSMB7Q99436 277 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 TM9SF3Q9HD45 589 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 STAP1Q9ULZ2 295 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 WASF3Q9UPY6 502 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 FNDC3AQ9Y2H6 1198 aaKnown RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 ACTL7AQ9Y615 435 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 TP53BP1Q12888 1972 aaPredicted RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 DOCK4Q8N1I0 1966 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 EPG5Q9HCE0 2579 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 A0A0D9SEW6 157 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 E9PAM4 449 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 LSM8O95777 96 aaKnown RBP12.22□□□□□ -0.45
LITAF-219ENST00000576334 IL1BP01584 269 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 SYPP08247 313 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
LITAF-219ENST00000576334 CDK11BP21127 795 aaKnown RBP12.22□□□□□ -0.45
LITAF-219ENST00000576334 MMP8P22894 467 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 GALCP54803 685 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 SNX16P57768 344 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 PTP4A2Q12974 167 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 ARID5BQ14865 1188 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 KIF19Q2TAC6 998 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 HLA-BQ31612 363 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 CCDC14Q49A88 953 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 C5orf22Q49AR2 442 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 ACCSLQ4AC99 568 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 ANO6Q4KMQ2 910 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 PRAMEF14Q5SWL7 426 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 TTC39BQ5VTQ0 682 aaPredicted RBP12.22□□□□□ -0.45
LITAF-219ENST00000576334 BNIPLQ7Z465 357 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 DNAAF5Q86Y56 855 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 HDDC3Q8N4P3 179 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 NEK11Q8NG66 645 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 OR7D4Q8NG98 312 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 SPAG5Q96R06 1193 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 MUC3BQ9H195 1237 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 GAREM1Q9H706 876 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 DNAAF2Q9NVR5 837 aaKnown RBP12.22□□□□□ -0.45
LITAF-219ENST00000576334 SUSD2Q9UGT4 822 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 VPS28Q9UK41 221 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 ANGPTL2Q9UKU9 493 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 SNX11Q9Y5W9 270 aa12.22□□□□□ -0.45
LITAF-219ENST00000576334 KMT2BQ9UMN6 2715 aaPredicted RBP12.21□□□□□ -0.45
LITAF-219ENST00000576334 TARSL2A2RTX5 802 aaKnown RBP12.21□□□□□ -0.45
LITAF-219ENST00000576334 LRRC10BA6NIK2 292 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 DRGXA6NNA5 263 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 FAM72CH0Y354 149 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 GOLGA6L22H0YM25 854 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 ZZEF1O43149 2961 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SMAD6O43541 496 aaKnown RBP12.21□□□□□ -0.45
LITAF-219ENST00000576334 RTN2O75298 545 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 CLDN11O75508 207 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SRCP12931 536 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 RRM1P23921 792 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 DRD3P35462 400 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SCNN1AP37088 669 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 STAT1P42224 750 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 CDH4P55283 916 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 PPP2CBP62714 309 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 PPP2CAP67775 309 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SIM1P81133 766 aaPredicted RBP12.21□□□□□ -0.45
LITAF-219ENST00000576334 ZBTB16Q05516 673 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SLC12A1Q13621 1099 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 DLG2Q15700 870 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 TTC31Q49AM3 519 aaPredicted RBP12.21□□□□□ -0.45
LITAF-219ENST00000576334 BRMS1LQ5PSV4 323 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 FAM72AQ5TYM5 149 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 KIAA0895LQ68EN5 471 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 FAM72DQ6L9T8 149 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.21□□□□□ -0.45
LITAF-219ENST00000576334 SND1Q7KZF4 910 aaKnown RBP eCLIP12.21□□□□□ -0.45
LITAF-219ENST00000576334 RABEPKQ7Z6M1 372 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 FAM72BQ86X60 149 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 KDM1BQ8NB78 822 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SLC6A18Q96N87 628 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 OMDQ99983 421 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 FBRSQ9HAH7 460 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SGK2Q9HBY8 427 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 NDFIP2Q9NV92 336 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
LITAF-219ENST00000576334 RRN3Q9NYV6 651 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 ZNF212Q9UDV6 495 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 VPS51Q9UID3 782 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 TBC1D30Q9Y2I9 924 aa12.21□□□□□ -0.45
LITAF-219ENST00000576334 ZFHX4Q86UP3 3567 aa12.21□□□□□ -0.46
LITAF-219ENST00000576334 C1QTNF9BB2RNN3 333 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 HYAL3O43820 417 aaPredicted RBP12.2□□□□□ -0.46
LITAF-219ENST00000576334 ATP9BO43861 1147 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 RNASEH1O60930 286 aaKnown RBP12.2□□□□□ -0.46
LITAF-219ENST00000576334 KRT37O76014 449 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 ENDOD1O94919 500 aa12.2□□□□□ -0.46
LITAF-219ENST00000576334 MBD3O95983 291 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms