RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ERAP1Q9NZ08 941 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRHDEQ9UKU6 1024 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 MRC1P22897 1456 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 FAM95CA0A1B0GW59 222 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ACO1P21399 889 aaKnown RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZC3H12AQ5D1E8 599 aaKnown RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 BLOC1S5Q8TDH9 187 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 REXO4Q9GZR2 422 aaKnown RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 TIPRLO75663 272 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 CABYRO75952 493 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ETFBP38117 255 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 CCT8P50990 548 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 NADK2Q4G0N4 442 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ARMCX4Q5H9R4 360 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 PSTKQ8IV42 348 aaKnown RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 EID3Q8N140 333 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 BCAS3Q9H6U6 928 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 MORF4L1Q9UBU8 362 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 UBQLN1Q9UMX0 589 aaKnown RBP13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 SLC30A1Q9Y6M5 507 aa13.34□□□□□ -0.27
PCDHGB3-201ENST00000576222 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ALOX12P18054 663 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ATP5F1P24539 256 aaPredicted RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ST13P50502 369 aaKnown RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC7A2P52569 658 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 PGAM4Q8N0Y7 254 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ATG16L2Q8NAA4 619 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ITFG1Q8TB96 612 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 PTPRHQ9HD43 1115 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 TUBA8Q9NY65 449 aaPredicted RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 FAM8A1Q9UBU6 413 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 LIMD1Q9UGP4 676 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 CCDC154A6NI56 674 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 LRCH4O75427 683 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMEM62Q0P6H9 643 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 DGCR6Q14129 220 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ARMC4Q5T2S8 1044 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 CACHD1Q5VU97 1274 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 EFHBQ8N7U6 833 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 KCTD4Q8WVF5 259 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 OMDQ99983 421 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 IDI2Q9BXS1 227 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 UGT2B28Q9BY64 529 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 PLIN3O60664 434 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ASS1P00966 412 aaKnown RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 CETPP11597 493 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 MPSTP25325 297 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 CHRNA5P30532 468 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ATP6V1E1P36543 226 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 PNPLA4P41247 253 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 SZRD1Q7Z422 152 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 SETD9Q8NE22 299 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 CELF6Q96J87 481 aaKnown RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 PANX3Q96QZ0 392 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF670Q9BS34 389 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 SYTL2Q9HCH5 934 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 USE1Q9NZ43 259 aa13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 TRMT6Q9UJA5 497 aaKnown RBP13.33□□□□□ -0.28
PCDHGB3-201ENST00000576222 TAF4O00268 1085 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 FAM20BO75063 409 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 CYP1A1P04798 512 aaPredicted RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 PRDX6P30041 224 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 RGS4P49798 205 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 CSE1LP55060 971 aaKnown RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 DLG1Q12959 904 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 CHST13Q8NET6 341 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 IL22Q9GZX6 179 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMEM161AQ9NX61 479 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TJP2Q9UDY2 1190 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 RAD54BQ9Y620 910 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 A6NHS1 94 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ASB14A6NK59 587 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SERPINI2O75830 405 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF682O95780 498 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 DNAJB2P25686 324 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 IREB2P48200 963 aaKnown RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TRAF3Q13114 568 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ADGRE1Q14246 886 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC35G1Q2M3R5 365 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ASRGL1Q7L266 308 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 PORCNQ9H237 461 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TDRKHQ9Y2W6 561 aaKnown RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 FADS3Q9Y5Q0 445 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 CRTAMO95727 393 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 GRIK1P39086 918 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 EPS8Q12929 822 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF846Q147U1 533 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 NR6A1Q15406 480 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms