RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FIBINQ8TAL6 211 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 FNIP1Q8TF40 1166 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 TBC1D31Q96DN5 1066 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 HAPLN3Q96S86 360 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 ZYG11BQ9C0D3 744 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 MRPL47Q9HD33 250 aaKnown RBP8.12□□□□□ -1.11
CCDC40-215ENST00000576033 ELOVL2Q9NXB9 296 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 CWC15Q9P013 229 aaKnown RBP8.12□□□□□ -1.11
CCDC40-215ENST00000576033 SLC12A6Q9UHW9 1150 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 SLCO3A1Q9UIG8 710 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 CDC23Q9UJX2 597 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 MMP17Q9ULZ9 603 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 CAPN6Q9Y6Q1 641 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 STON1Q9Y6Q2 735 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 NUP205Q92621 2012 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 ANKRD36A6QL64 1941 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 NUMA1Q14980 2115 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 GPR179Q6PRD1 2367 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 A0A0A0MRY4 1105 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 A0A0A6YYK5 440 aaPredicted RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 MACROD2A1Z1Q3 448 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 CTAGE9A4FU28 777 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 EEF2KO00418 725 aaKnown RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 LAMTOR5O43504 91 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 SMAD6O43541 496 aaKnown RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 PRPSAP2O60256 369 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 GJB3O75712 270 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 MTA2O94776 668 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 MOCS3O95396 460 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 HOXB2P14652 356 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 AMPD1P23109 780 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 EPHB2P29323 1055 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 OR1E1P30953 314 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 L1CAMP32004 1257 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 TNFRSF4P43489 277 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 CDH4P55283 916 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 TPI1P60174 286 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 ARF5P84085 180 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 LPAL2Q16609 132 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 POM121L1PQ3SYA9 428 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 FNDC3BQ53EP0 1204 aaKnown RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 ERMARDQ5T6L9 678 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 PPP1R2P3Q6NXS1 205 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 AADACL2Q6P093 401 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 B4GALNT4Q76KP1 1039 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 AHI1Q8N157 1196 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 SPEM1Q8N4L4 309 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 LRRN4CLQ8ND94 238 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 TRIM58Q8NG06 486 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 HMGB4Q8WW32 186 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 RLN3Q8WXF3 142 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 ANKRD7Q92527 254 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 RAPGEF5Q92565 580 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 KRT35Q92764 455 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 HMCESQ96FZ2 354 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 DDX50Q9BQ39 737 aaKnown RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 HERPUD2Q9BSE4 406 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 MUC3BQ9H195 1237 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 OSBPL2Q9H1P3 480 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 PCDH18Q9HCL0 1135 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 LUC7LQ9NQ29 371 aaKnown RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 THAP10Q9P2Z0 257 aaPredicted RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 IP6K2Q9UHH9 426 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 VPS51Q9UID3 782 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 GUCA1BQ9UMX6 200 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 PACSIN2Q9UNF0 486 aaPredicted RBP8.11□□□□□ -1.11
CCDC40-215ENST00000576033 PLXND1Q9Y4D7 1925 aa8.11□□□□□ -1.11
CCDC40-215ENST00000576033 DMXL1Q9Y485 3027 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 CEP192Q8TEP8 1941 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 TYW5A2RUC4 315 aaKnown RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 GRID2IPA4D2P6 1211 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 C3orf70A6NLC5 250 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 MYO1FO00160 1098 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 PLK4O00444 970 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 NCAM2O15394 837 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 MFSD11O43934 449 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 SIN3BO75182 1162 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 CLDN11O75508 207 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ZMPSTE24O75844 475 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 RNF8O76064 485 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 URI1O94763 535 aaPredicted RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 CD160O95971 181 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 KRT1P04264 644 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 EPHX1P07099 455 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 PRLRP16471 622 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ERCC2P18074 760 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 GABRG2P18507 467 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 NDUFV2P19404 249 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 BCKDHBP21953 392 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 COMTP21964 271 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 IL4RP24394 825 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 NTSR1P30989 418 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 GKP32189 559 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 PCK1P35558 622 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 NOP2P46087 812 aaKnown RBP8.1□□□□□ -1.11
CCDC40-215ENST00000576033 CXCL12P48061 93 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 CCR3P51677 355 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 ARSEP51690 589 aa8.1□□□□□ -1.11
CCDC40-215ENST00000576033 COPAP53621 1224 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms