RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 GDF3Q9NR23 364 aa12.45□□□□□ -0.42
TRIM25-207ENST00000573108 ST7Q9NRC1 585 aa12.45□□□□□ -0.42
TRIM25-207ENST00000573108 AJAP1Q9UKB5 411 aaPredicted RBP12.45□□□□□ -0.42
TRIM25-207ENST00000573108 SHROOM3Q8TF72 1996 aa12.45□□□□□ -0.42
TRIM25-207ENST00000573108 ASXL3Q9C0F0 2248 aa12.45□□□□□ -0.42
TRIM25-207ENST00000573108 GTPBP10A4D1E9 387 aaKnown RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 EIF4E1BA6NMX2 242 aaKnown RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 TLR4O00206 839 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 MOCS3O95396 460 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 ADH1BP00325 375 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 IL1BP01584 269 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 PRB1P04280 392 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 TACR2P21452 398 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 C5AR1P21730 350 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 MZF1P28698 734 aaPredicted RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 GPD2P43304 727 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 RPL34P49207 117 aaKnown RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 PITX1P78337 314 aaPredicted RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 SEMG2Q02383 582 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 TARDBPQ13148 414 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 NNTQ13423 1086 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 HES3Q5TGS1 186 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 CDKAL1Q5VV42 579 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 RNF219Q5W0B1 726 aaPredicted RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 DENND1BQ6P3S1 775 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 CIR1Q86X95 450 aaPredicted RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 SPATS2Q86XZ4 545 aaKnown RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 CCDC117Q8IWD4 279 aaPredicted RBP12.44□□□□□ -0.42
TRIM25-207ENST00000573108 TSC1Q92574 1164 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 NXPE2Q96DL1 559 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 ACP6Q9NPH0 428 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 ANO10Q9NW15 660 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 FANCLQ9NW38 375 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 ARHGAP20Q9P2F6 1191 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 CYTH4Q9UIA0 394 aa12.44□□□□□ -0.42
TRIM25-207ENST00000573108 KNTC1P50748 2209 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3DA0A087WVF3 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3EA0A087X179 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3KA0A087X1G2 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3FA6NER0 549 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 BECN2A8MW95 431 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3LB9A6J9 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 LATO43561 262 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 RTN2O75298 545 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 APOEP02649 317 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 C1SP09871 688 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3HP0C7X1 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 KRT5P13647 590 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 PDGFRAP16234 1089 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 MAT2AP31153 395 aaKnown RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 HNF1BP35680 557 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 EIF2S3P41091 472 aaKnown RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 ARRB1P49407 418 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 ARHGAP44Q17R89 818 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 C6orf118Q5T5N4 469 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 SFMBT2Q5VUG0 894 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3GQ6DHY5 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3CQ6IPX1 549 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 CAVIN1Q6NZI2 390 aaKnown RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 FBXL19Q6PCT2 694 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 KANSL1Q7Z3B3 1105 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TBC1D3Q8IZP1 549 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TAB2Q9NYJ8 693 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 APEX2Q9UBZ4 518 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TJP2Q9UDY2 1190 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 SARDHQ9UL12 918 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 AK5Q9Y6K8 562 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 ARID1BQ8NFD5 2236 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-207ENST00000573108 TENM4Q6N022 2769 aa12.43□□□□□ -0.42
TRIM25-207ENST00000573108 MGAQ8IWI9 3026 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 E5RJQ4 531 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 CAPN9O14815 690 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 YKT6O15498 198 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 TRUB2O95900 331 aaKnown RBP12.42□□□□□ -0.42
TRIM25-207ENST00000573108 IGLV3-25P01717 112 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 RXRGP48443 463 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 TYRO3Q06418 890 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 ELAVL3Q14576 367 aaKnown RBP12.42□□□□□ -0.42
TRIM25-207ENST00000573108 NCAPHQ15003 741 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 TAF5Q15542 800 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 STX1AQ16623 288 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 POM121L1PQ3SYA9 428 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 NAPEPLDQ6IQ20 393 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 BEND5Q7L4P6 421 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 ENOSF1Q7L5Y1 443 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
TRIM25-207ENST00000573108 FRS2Q8WU20 508 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 FAM131CQ96AQ9 280 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 BTN2A3PQ96KV6 586 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 PRMT1Q99873 361 aaKnown RBP12.42□□□□□ -0.42
TRIM25-207ENST00000573108 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 VPS16Q9H269 839 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 HSD3B7Q9H2F3 369 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 ERVMER34-1Q9H9K5 563 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 CA5BQ9Y2D0 317 aa12.42□□□□□ -0.42
TRIM25-207ENST00000573108 RAI2Q9Y5P3 530 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms