RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SETD7Q8WTS6 366 aaKnown RBP18.64■□□□□ 0.57
CHD3-214ENST00000572579 ADAMTS14Q8WXS8 1223 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 TBCBQ99426 244 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 TKTL2Q9H0I9 626 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 SIK2Q9H0K1 926 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 RAB6CQ9H0N0 254 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 NUP62CLQ9H1M0 184 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 NCKAP1Q9Y2A7 1128 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 CEP83Q9Y592 693 aa18.64■□□□□ 0.57
CHD3-214ENST00000572579 A0A1W2PR77 199 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 DRGXA6NNA5 263 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 EPHB6O15197 1021 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 ATP9BO43861 1147 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 MMEP08473 750 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 ATXN1LP0C7T5 689 aaKnown RBP18.63■□□□□ 0.57
CHD3-214ENST00000572579 GOT1P17174 413 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 FLT3P36888 993 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 ADPRHP54922 357 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 PPP2CBP62714 309 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 PPP2CAP67775 309 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 RABGAP1LQ5R372 815 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 TTC39BQ5VTQ0 682 aaPredicted RBP18.63■□□□□ 0.57
CHD3-214ENST00000572579 MARCH9Q86YJ5 346 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 OR2T34Q8NGX1 318 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 NOX5Q96PH1 765 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 OMDQ99983 421 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 GANQ9H2C0 597 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 TAB2Q9NYJ8 693 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHD3-214ENST00000572579 ARHGAP20Q9P2F6 1191 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 ZNF212Q9UDV6 495 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 TMEM59LQ9UK28 342 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 PPM1HQ9ULR3 514 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 FZD4Q9ULV1 537 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 PCDHB9Q9Y5E1 797 aa18.63■□□□□ 0.57
CHD3-214ENST00000572579 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 K7ERQ8 282 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 VILLO15195 856 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 SNAP91O60641 907 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 RNASEH1O60930 286 aaKnown RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 TRIM16O95361 564 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 IL1BP01584 269 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 CHRNB2P17787 502 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 C5AR1P21730 350 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 RACK1P63244 317 aaKnown RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 IL9RQ01113 521 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 ZNF177Q13360 481 aaPredicted RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 ELAVL3Q14576 367 aaKnown RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 RNF219Q5W0B1 726 aaPredicted RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 FAM114A1Q8IWE2 563 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 TMEM35BQ8NCS4 154 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 OR14C36Q8NHC7 312 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 GPT2Q8TD30 523 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 SLC20A1Q8WUM9 679 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 CPA5Q8WXQ8 436 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 C18orf8Q96DM3 657 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 PGAP3Q96FM1 320 aaPredicted RBP18.62■□□□□ 0.57
CHD3-214ENST00000572579 STK33Q9BYT3 514 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 SYNCQ9H7C4 482 aa18.62■□□□□ 0.57
CHD3-214ENST00000572579 A0A0D9SEW6 157 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 SRRM3A6NNA2 597 aaPredicted RBP18.61■□□□□ 0.57
CHD3-214ENST00000572579 F8VZ95 297 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 RTN2O75298 545 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 CLDN11O75508 207 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 CTSLP07711 333 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 CCR5P51681 352 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 BPIFB4P59827 614 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 SULT2A1Q06520 285 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 TEAD4Q15561 434 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 DLG2Q15700 870 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 POM121L1PQ3SYA9 428 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 CDKAL1Q5VV42 579 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 CCNI2Q6ZMN8 369 aaPredicted RBP18.61■□□□□ 0.57
CHD3-214ENST00000572579 Q6ZVU0 165 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 ZDHHC17Q8IUH5 632 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 EPS8L1Q8TE68 723 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 RHBDD1Q8TEB9 315 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 WDCPQ9H6R7 721 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 MPP6Q9NZW5 540 aa18.61■□□□□ 0.57
CHD3-214ENST00000572579 NOCTQ9UK39 431 aaKnown RBP18.61■□□□□ 0.57
CHD3-214ENST00000572579 LRRC72A6NJI9 287 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 LATO43561 262 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 PCDHGA12O60330 932 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 ADH1BP00325 375 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 GLDCP23378 1020 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 SCNN1AP37088 669 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 SULT1E1P49888 294 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 CDH4P55283 916 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 TAS2R38P59533 333 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 NOMO3P69849 1222 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 SLC25A52Q3SY17 297 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 SND1Q7KZF4 910 aaKnown RBP eCLIP18.6■□□□□ 0.57
CHD3-214ENST00000572579 ERICH1Q86X53 443 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 SH2D3CQ8N5H7 860 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 ENOX1Q8TC92 643 aaKnown RBP18.6■□□□□ 0.57
CHD3-214ENST00000572579 SPAG5Q96R06 1193 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 MAGEB5Q9BZ81 275 aa18.6■□□□□ 0.57
CHD3-214ENST00000572579 PKD1L2Q7Z442 2459 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 IGLV3-10A0A075B6K4 115 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms