RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NRXN2Q9P2S2 1712 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 BCORQ6W2J9 1755 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 IPO8O15397 1037 aaKnown RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 VIPP01282 170 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 PECAM1P16284 738 aaPredicted RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 MMP8P22894 467 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 PTGER1P34995 402 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 WDR5P61964 334 aaKnown RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 RPS8P62241 208 aaKnown RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 RAE1P78406 368 aaKnown RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 HSF1Q00613 529 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 GHRHRQ02643 423 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 CFHR1Q03591 330 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 GRAPQ13588 217 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 GCKRQ14397 625 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 ETFDHQ16134 617 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 TMEM196Q5HYL7 178 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 ARL6IP4Q66PJ3 421 aaKnown RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 IL31Q6EBC2 164 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 ANO7Q6IWH7 933 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 DEF8Q6ZN54 512 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 CNGA4Q8IV77 575 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 GRAPLQ8TC17 118 aaPredicted RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 PARD3BQ8TEW8 1205 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 ZNF566Q969W8 418 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 COQ8BQ96D53 544 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 PSMD1Q99460 953 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.6□□□□□ -1.67
NUP88-202ENST00000570937 SMC4Q9NTJ3 1288 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 ABHD10Q9NUJ1 306 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 DTNAQ9Y4J8 743 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 CDHR2Q9BYE9 1310 aa4.6□□□□□ -1.67
NUP88-202ENST00000570937 AFDNP55196 1824 aaKnown RBP4.6□□□□□ -1.67
NUP88-202ENST00000570937 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.59□□□□□ -1.67
NUP88-202ENST00000570937 GLTPD2A6NH11 291 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 ABCC4O15439 1325 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 ADCY9O60503 1353 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 IGKV5-2P06315 115 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 VEGFAP15692 232 aaPredicted RBP4.59□□□□□ -1.67
NUP88-202ENST00000570937 MATN1P21941 496 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 TACR3P29371 465 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 IGHMBP2P38935 993 aaKnown RBP4.59□□□□□ -1.67
NUP88-202ENST00000570937 MMP13P45452 471 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 NEK3P51956 506 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 NUP98P52948 1817 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 SEMA3BQ13214 749 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 CHD4Q14839 1912 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 PFKFB3Q16875 520 aaPredicted RBP4.59□□□□□ -1.67
NUP88-202ENST00000570937 MPEG1Q2M385 716 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 ARHGAP15Q53QZ3 475 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 DGKKQ5KSL6 1271 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 G2E3Q7L622 706 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 N4BP2Q86UW6 1770 aaPredicted RBP4.59□□□□□ -1.67
NUP88-202ENST00000570937 ANKRD18AQ8IVF6 992 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 PRSS3P2Q8NHM4 247 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 DEPTORQ8TB45 409 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 GRAMD1AQ96CP6 724 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 ABCC12Q96J65 1359 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 SGCZQ96LD1 299 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 SIGLEC11Q96RL6 698 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 EYA3Q99504 573 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 MPHOSPH8Q99549 860 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 API5Q9BZZ5 524 aaKnown RBP4.59□□□□□ -1.67
NUP88-202ENST00000570937 NUAK2Q9H093 628 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 VPS16Q9H269 839 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 CERS4Q9HA82 394 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 PI4KBQ9UBF8 816 aa4.59□□□□□ -1.67
NUP88-202ENST00000570937 SIRT4Q9Y6E7 314 aaPredicted RBP4.59□□□□□ -1.67
NUP88-202ENST00000570937 ZBED9Q6R2W3 1325 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 KIF16BQ96L93 1317 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 GXYLT2A0PJZ3 443 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 ANKRD18BA2A2Z9 1011 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 C16orf96A6NNT2 1141 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 GRM8O00222 908 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 PODXLO00592 558 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 PPEF2O14830 753 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 PLA2G6O60733 806 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 CNOT3O75175 753 aaKnown RBP4.58□□□□□ -1.68
NUP88-202ENST00000570937 GLP2RO95838 553 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 DRD1P21728 446 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 HSPA7P48741 367 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 CCT4P50991 539 aaKnown RBP4.58□□□□□ -1.68
NUP88-202ENST00000570937 KRTAP10-11P60412 298 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 RAB30Q15771 203 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 FAM110CQ1W6H9 321 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 CCDC57Q2TAC2 916 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 Q4G0T1 1027 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 BEND3Q5T5X7 828 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 C10orf25Q5T742 122 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 CCDC144NLQ6NUI1 221 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 ACSM6Q6P461 480 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 FBXO38Q6PIJ6 1188 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 PIK3AP1Q6ZUJ8 805 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 OR52L2PQ8NGH6 319 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 C16orf52Q8NHV5 167 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 GLMPQ8WWB7 406 aa4.58□□□□□ -1.68
NUP88-202ENST00000570937 IGFBPL1Q8WX77 278 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms