RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 CNGA3Q16281 694 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 ARHGAP17Q68EM7 881 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 STRADAQ7RTN6 431 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 PID1Q7Z2X4 250 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 KYQ8NBH2 561 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 ACVR1CQ8NER5 493 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 RNF139Q8WU17 664 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 NDRG1Q92597 394 aaKnown RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 ZMAT2Q96NC0 199 aaKnown RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 CDRT15Q96T59 188 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 LRRC40Q9H9A6 602 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 PDGFCQ9NRA1 345 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 NDUFA13Q9P0J0 144 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 PRPF19Q9UMS4 504 aaKnown RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 HES2Q9Y543 173 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 CSADQ9Y600 493 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 SHROOM3Q8TF72 1996 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 IQCA1LA6NCM1 817 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 KCNK1O00180 336 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 AMHP03971 560 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 TFAP2AP05549 437 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 C2P06681 752 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 EPHA3P29320 983 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 FLOT2Q14254 428 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 PDK1Q15118 436 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 LSM12Q3MHD2 195 aaKnown RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 NT5DC4Q86YG4 428 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 ANKRD52Q8NB46 1076 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 DRAXINQ8NBI3 349 aaPredicted RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 URGCPQ8TCY9 931 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 DGCR14Q96DF8 476 aaKnown RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 SERPINI1Q99574 410 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 FERMT1Q9BQL6 677 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 ILKAPQ9H0C8 392 aaPredicted RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 NMRAL1Q9HBL8 299 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 ERAP1Q9NZ08 941 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 IGSF9Q9P2J2 1179 aa17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 RCOR3Q9P2K3 495 aaPredicted RBP17.23■□□□□ 0.35
PCDHB19P-201ENST00000570871 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 ZCWPW2A0A1B0GU75 182 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 RGSL1A5PLK6 1076 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 MATN2O00339 956 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 VILLO15195 856 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 ATP9BO43861 1147 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 CREB3O43889 395 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 CRTAMO95727 393 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 MPOP05164 745 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 SULT1E1P49888 294 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 BCAT1P54687 386 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 ITGA7Q13683 1181 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 ZNF423Q2M1K9 1284 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 HSP90AA5PQ58FG0 334 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 C16orf89Q6UX73 402 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 BNC2Q6ZN30 1099 aaPredicted RBP17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 DEFB106AQ8N104 65 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 LINC01465Q8N7H1 131 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 ADAM32Q8TC27 787 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 MPP4Q96JB8 637 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 CNDP1Q96KN2 507 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 LRGUKQ96M69 825 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 MAGED2Q9UNF1 606 aaPredicted RBP17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 CLPTM1O96005 669 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 CYP2C8P10632 490 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 SCNN1AP37088 669 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 RPL5P46777 297 aaKnown RBP17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 IREB2P48200 963 aaKnown RBP17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 PKNOX1P55347 436 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 ADGRE1Q14246 886 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 PIGGQ5H8A4 983 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 ZNF484Q5JVG2 852 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 RARS2Q5T160 578 aaKnown RBP17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 RBM44Q6ZP01 1051 aaKnown RBP17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 NLRP7Q8WX94 980 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 SREK1Q8WXA9 508 aaKnown RBP17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 RCN3Q96D15 328 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 RNF19AQ9NV58 838 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 OXSMQ9NWU1 459 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 RIMS3Q9UJD0 308 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 VANGL2Q9ULK5 521 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 LZTS1Q9Y250 596 aa17.22■□□□□ 0.35
PCDHB19P-201ENST00000570871 GJA5P36382 358 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 MATKP42679 507 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 MS4A2Q01362 244 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 CEACAM7Q14002 265 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 MAP7Q14244 749 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 GK3PQ14409 553 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 PABPC1LQ4VXU2 614 aaKnown RBP17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 TMEM135Q86UB9 458 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 LILRA2Q8N149 483 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 METTL25Q8N6Q8 603 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 RNF148Q8N7C7 305 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 FAM149B1Q96BN6 582 aa17.21■□□□□ 0.35
PCDHB19P-201ENST00000570871 MFSD3Q96ES6 412 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms