RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 MYOCQ99972 504 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 SIK2Q9H0K1 926 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 PLCB1Q9NQ66 1216 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 GDF3Q9NR23 364 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 ADAMTS1Q9UHI8 967 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC12A6Q9UHW9 1150 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 SARDHQ9UL12 918 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 VANGL2Q9ULK5 521 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 FZD4Q9ULV1 537 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 SNX10Q9Y5X0 201 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 TDRD6O60522 2096 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 ITIH6Q6UXX5 1313 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 TLR4O00206 839 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 DFNA5O60443 496 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 SDC3O75056 442 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 ERBB2P04626 1255 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 ZNF18P17022 549 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 CCR1P32246 355 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 CCR5P51681 352 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 MARSP56192 900 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 NXPH1P58417 271 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 RNASE9P60153 205 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 CNTN1Q12860 1018 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 EIF4EBP2Q13542 120 aaPredicted RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 AUHQ13825 339 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 ELAVL3Q14576 367 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 DLG2Q15700 870 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 SMAD1Q15797 465 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 INAVAQ3KP66 663 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 SOWAHCQ53LP3 525 aaPredicted RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 RABGAP1LQ5R372 815 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 TRIM65Q6PJ69 517 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 FAM183BPQ6ZVS7 135 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 Q6ZVU0 165 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 BEND5Q7L4P6 421 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 SPATS2Q86XZ4 545 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 KDM1BQ8NB78 822 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 C1orf131Q8NDD1 294 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 FRS2Q8WU20 508 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 OR8D1Q8WZ84 308 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 SKA1Q96BD8 255 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 ALG14Q96F25 216 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC2A13Q96QE2 648 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 SPAG5Q96R06 1193 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 FEM1AQ9BSK4 669 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 TRIM62Q9BVG3 475 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 VPS28Q9UK41 221 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 AJAP1Q9UKB5 411 aaPredicted RBP8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 GTF3C3Q9Y5Q9 886 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 HS3ST4Q9Y661 456 aa8.86□□□□□ -0.99
CTDNEP1-203ENST00000570385 PTPRQQ9UMZ3 2332 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 A0A1B0GVM2 712 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 TCAF2A6NFQ2 919 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 K7ERQ8 282 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 M0QYT0 321 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 RNF103O00237 685 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC31A1O15431 190 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SNAP91O60641 907 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 HSF2BPO75031 334 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 PAGE1O75459 146 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 RFPL3O75679 317 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 CNTN5O94779 1100 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ENDOD1O94919 500 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 MT-CO1P00395 513 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC2A3P11169 496 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 PRLRP16471 622 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 TFE3P19532 575 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 EPHA8P29322 1005 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ARRB1P49407 418 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SEMG2Q02383 582 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SULT2A1Q06520 285 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 TARDBPQ13148 414 aaKnown RBP eCLIP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ZNF177Q13360 481 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ACAP1Q15027 740 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 PTPN20Q4JDL3 420 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC45A4Q5BKX6 768 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 EFHC1Q5JVL4 640 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 HES3Q5TGS1 186 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 AGBL4Q5VU57 503 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 NAPEPLDQ6IQ20 393 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 FOXR2Q6PJQ5 311 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 GBP6Q6ZN66 633 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 C11orf57Q6ZUT1 292 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ENOSF1Q7L5Y1 443 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 PRPF39Q86UA1 669 aaKnown RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC47A2Q86VL8 602 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 TMPRSS12Q86WS5 348 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ELOA2Q8IYF1 753 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 PDCD7Q8N8D1 485 aaKnown RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 PIP4K2CQ8TBX8 421 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 BBC3Q96PG8 261 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 MUC3BQ9H195 1237 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SYNCQ9H7C4 482 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ANLNQ9NQW6 1124 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 TMPRSS4Q9NRS4 437 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 ARHGAP20Q9P2F6 1191 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 APEX2Q9UBZ4 518 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC25A13Q9UJS0 675 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms