RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 AKT2P31751 481 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 TXLNAP40222 546 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 RPIAP49247 311 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 CYP4F2P78329 520 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 KCNAB2Q13303 367 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 FAM133BQ5BKY9 247 aaKnown RBP18.66■□□□□ 0.58
CLK3-227ENST00000570296 PERM1Q5SV97 790 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 PPP1R26Q5T8A7 1209 aaPredicted RBP18.66■□□□□ 0.58
CLK3-227ENST00000570296 CRYBG3Q68DQ2 2970 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 EPM2AIP1Q7L775 607 aaPredicted RBP18.66■□□□□ 0.58
CLK3-227ENST00000570296 ABI3BPQ7Z7G0 1075 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 VASH2Q86V25 355 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 CCDC117Q8IWD4 279 aaPredicted RBP18.66■□□□□ 0.58
CLK3-227ENST00000570296 PLEKHO2Q8TD55 490 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 RNF139Q8WU17 664 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 MYOCQ99972 504 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 STIM2Q9P246 746 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 SFMBT1Q9UHJ3 866 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 CEP83Q9Y592 693 aa18.66■□□□□ 0.58
CLK3-227ENST00000570296 SPENQ96T58 3664 aaKnown RBP18.65■□□□□ 0.58
CLK3-227ENST00000570296 TYW5A2RUC4 315 aaKnown RBP18.65■□□□□ 0.58
CLK3-227ENST00000570296 LRRIQ3A6PVS8 624 aaPredicted RBP18.65■□□□□ 0.58
CLK3-227ENST00000570296 H3BM21 787 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 TPP1O14773 563 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 ZBED1O96006 694 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 ASS1P00966 412 aaKnown RBP18.65■□□□□ 0.58
CLK3-227ENST00000570296 NME1P15531 152 aaKnown RBP18.65■□□□□ 0.58
CLK3-227ENST00000570296 PRLRP16471 622 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 HNRNPA2B1P22626 353 aaKnown RBP18.65■□□□□ 0.58
CLK3-227ENST00000570296 SLC11A2P49281 568 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 CNTN1Q12860 1018 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 CDH18Q13634 790 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 ZNF542PQ5EBM4 170 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 NEK5Q6P3R8 708 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 BORAQ6PGQ7 559 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 SPATA20Q8TB22 786 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 PARD3BQ8TEW8 1205 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 SRRTQ9BXP5 876 aaKnown RBP18.65■□□□□ 0.58
CLK3-227ENST00000570296 STRADBQ9C0K7 418 aa18.65■□□□□ 0.58
CLK3-227ENST00000570296 H3BQV1 296 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 NTN3O00634 580 aaPredicted RBP18.64■□□□□ 0.57
CLK3-227ENST00000570296 MUSKO15146 869 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 CSF2P04141 144 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 WT1P19544 449 aaPredicted RBP18.64■□□□□ 0.57
CLK3-227ENST00000570296 SLC6A4P31645 630 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 NNMTP40261 264 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 GCNT7Q6ZNI0 430 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 BHLHA9Q7RTU4 235 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 PIGZQ86VD9 579 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 C12orf56Q8IXR9 622 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 GLMNQ92990 594 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 NOX5Q96PH1 765 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 CYP3A43Q9HB55 503 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 EPB41L5Q9HCM4 733 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 GPR27Q9NS67 375 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 CGNQ9P2M7 1197 aaKnown RBP18.64■□□□□ 0.57
CLK3-227ENST00000570296 PCDHB11Q9Y5F2 797 aa18.64■□□□□ 0.57
CLK3-227ENST00000570296 GOLGA6L7A0A1B0GV03 622 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 A0A1W2PQU0 124 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 A6NNZ2 444 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 AQP9O43315 295 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 MSI1O43347 362 aaKnown RBP18.63■□□□□ 0.57
CLK3-227ENST00000570296 EXOC3O60645 756 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 STAT6P42226 847 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 CD97P48960 835 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 TKTL1P51854 596 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 POLE2P56282 527 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 ZNF284Q2VY69 593 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 DEFB133Q30KQ1 61 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 ZACNQ401N2 412 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 FSCBQ5H9T9 825 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 NUGGCQ68CJ6 796 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 SPOPLQ6IQ16 392 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 MMS22LQ6ZRQ5 1243 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 UNC45BQ8IWX7 931 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 CARNMT1Q8N4J0 409 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 OR8D1Q8WZ84 308 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 AZIN2Q96A70 460 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 RPL10LQ96L21 214 aaKnown RBP18.63■□□□□ 0.57
CLK3-227ENST00000570296 PRICKLE1Q96MT3 831 aaPredicted RBP18.63■□□□□ 0.57
CLK3-227ENST00000570296 CCDC3Q9BQI4 270 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 BOCQ9BWV1 1114 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 SARDHQ9UL12 918 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 PLAAQ9Y263 795 aa18.63■□□□□ 0.57
CLK3-227ENST00000570296 TRPM6Q9BX84 2022 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 C1QTNF3-AMACRE9PGA6 284 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 ACSL4O60488 711 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 IGLV3-27P01718 113 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 VAV1P15498 845 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 TAS2R38P59533 333 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 FZD2Q14332 565 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 DRAP1Q14919 205 aaPredicted RBP18.62■□□□□ 0.57
CLK3-227ENST00000570296 Q6ZSR6 202 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 B3GNT8Q7Z7M8 397 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 PARGQ86W56 976 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 ATCAYQ86WG3 371 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 HORMAD1Q86X24 394 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 DTX1Q86Y01 620 aa18.62■□□□□ 0.57
CLK3-227ENST00000570296 KLK6Q92876 244 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms