RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CCDC110Q8TBZ0 833 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 SLC22A17Q8WUG5 538 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 NSMCE1Q8WV22 266 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 CPT1BQ92523 772 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 PRCCQ92733 491 aaPredicted RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 HLA-CQ95604 372 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 EXOC4Q96A65 974 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 P2RY11Q96G91 374 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 CELF6Q96J87 481 aaKnown RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 TTC25Q96NG3 672 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 TSGA13Q96PP4 275 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 PPP1R2P1Q96PQ5 205 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 RBM15Q96T37 977 aaKnown RBP eCLIP7.83□□□□□ -1.16
CDH13-214ENST00000569455 PRMT1Q99873 361 aaKnown RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 LRRC3Q9BY71 257 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 TXLNGYQ9BZA5 131 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 RNF38Q9H0F5 515 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 PABPC3Q9H361 631 aaKnown RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 MED4Q9NPJ6 270 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 RAB6BQ9NRW1 208 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 ZDHHC7Q9NXF8 308 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 MPP6Q9NZW5 540 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 SEPT10Q9P0V9 454 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 KLHL8Q9P2G9 620 aaPredicted RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 TRHDEQ9UKU6 1024 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 NEU3Q9UQ49 428 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 FAM50BQ9Y247 325 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 ZNF510Q9Y2H8 683 aa7.83□□□□□ -1.16
CDH13-214ENST00000569455 FARP1Q9Y4F1 1045 aaPredicted RBP7.83□□□□□ -1.16
CDH13-214ENST00000569455 USP34Q70CQ2 3546 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 A0A1W2PRU2 124 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 GOLGA6CA6NDK9 693 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 GOLGA6L10A6NI86 522 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 ZNF197O14709 1029 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 TP73O15350 636 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 PSMD3O43242 534 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 RAMP2O60895 175 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CLDN11O75508 207 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 NEBLO76041 1014 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 GOLGA6DP0CG33 693 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 IRF1P10914 325 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 EPCAMP16422 314 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 TPSB2P20231 275 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 PTPN3P26045 913 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CHKAP35790 457 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 MAGEA6P43360 314 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 EPHA5P54756 1037 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CDH4P55283 916 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 YBEYP58557 167 aaPredicted RBP7.82□□□□□ -1.16
CDH13-214ENST00000569455 FAM193AP78312 1265 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 SLC7A9P82251 487 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CYP4F8P98187 520 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CDK16Q00536 496 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 IFFO1Q0D2I5 559 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 SEMA5AQ13591 1074 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 PRPSAP1Q14558 356 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 KCNJ11Q14654 390 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 TPSAB1Q15661 275 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 HIF1AQ16665 826 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 PARP6Q2NL67 630 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 PARP15Q460N3 678 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 C6orf118Q5T5N4 469 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 AFMIDQ63HM1 303 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 NADSYN1Q6IA69 706 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 GAREM2Q75VX8 874 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CHST9Q7L1S5 443 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 PID1Q7Z2X4 250 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 NLRP14Q86W24 1093 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 RELL1Q8IUW5 271 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 ARHGAP12Q8IWW6 846 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 HS6ST3Q8IZP7 471 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 IQCKQ8N0W5 287 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 KRT222Q8N1A0 295 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 TAB3Q8N5C8 712 aaPredicted RBP7.82□□□□□ -1.16
CDH13-214ENST00000569455 ARL14EPQ8N8R7 260 aaPredicted RBP7.82□□□□□ -1.16
CDH13-214ENST00000569455 MAB21L3Q8N8X9 362 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 MCUQ8NE86 351 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 IGSF8Q969P0 613 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 NECTIN4Q96NY8 510 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 SLC39A8Q9C0K1 460 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CDC42EP4Q9H3Q1 356 aaKnown RBP7.82□□□□□ -1.16
CDH13-214ENST00000569455 ETNK1Q9HBU6 452 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 SAYSD1Q9NPB0 183 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 EIF2B3Q9NR50 452 aaKnown RBP7.82□□□□□ -1.16
CDH13-214ENST00000569455 GKN1Q9NS71 199 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 HAUS2Q9NVX0 235 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 SMPD4Q9NXE4 827 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 GOLGA6AQ9NYA3 693 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 OGFRQ9NZT2 677 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 NYNRINQ9P2P1 1898 aaKnown RBP7.82□□□□□ -1.16
CDH13-214ENST00000569455 STOML2Q9UJZ1 356 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 PLAAQ9Y263 795 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 SH3BP1Q9Y3L3 701 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 HCFC2Q9Y5Z7 792 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CPQQ9Y646 472 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 CHD5Q8TDI0 1954 aa7.82□□□□□ -1.16
CDH13-214ENST00000569455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.81□□□□□ -1.16
CDH13-214ENST00000569455 GOLGA6L7A0A1B0GV03 622 aa7.81□□□□□ -1.16
CDH13-214ENST00000569455 A0A1B0GVM2 712 aa7.81□□□□□ -1.16
CDH13-214ENST00000569455 TCAF2A6NFQ2 919 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms