RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PARGQ86W56 976 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 SLITRK4Q8IW52 837 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 CSGALNACT2Q8N6G5 542 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 Q8NA96 180 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 LMX1AQ8TE12 382 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 CACTINQ8WUQ7 758 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 STARD8Q92502 1023 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 TNFRSF25Q93038 417 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 TTC17Q96AE7 1141 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 CCDC74AQ96AQ1 378 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 KIAA1143Q96AT1 154 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 TBATAQ96M53 351 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 B3GNT5Q9BYG0 378 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 ABCB8Q9NUT2 735 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 OSER1Q9NX31 292 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 RRN3Q9NYV6 651 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 AKAP7Q9P0M2 348 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 SPASTQ9UBP0 616 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 KLF15Q9UIH9 416 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 KCND3Q9UK17 655 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 ITGA11Q9UKX5 1188 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 AGO1Q9UL18 857 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 NME7Q9Y5B8 376 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 SEC16AO15027 2179 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 PKD1L1Q8TDX9 2849 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 LOC101059948A0A1B0GTJ6 334 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 ANKUB1A6NFN9 424 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 A6NNZ2 444 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 WNT7AO00755 349 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 GRID2O43424 1007 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 PPP6R2O75170 966 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 ASLP04424 464 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 FAM163BP0C2L3 166 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 CCL4P13236 92 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 JUNDP17535 347 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 PTPN1P18031 435 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 PDCP20941 246 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 MZF1P28698 734 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 PDIA3P30101 505 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 SSTR2P30874 369 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 CORO1AP31146 461 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 GNL1P36915 607 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 CCT6AP40227 531 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 EVCP57679 992 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 RBP5P82980 135 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 COG7P83436 770 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 TFAMQ00059 246 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 ART3Q13508 389 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 KRT32Q14532 448 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 C16orf72Q14CZ0 275 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 ATP1A1-AS1Q5TC04 95 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 C16orf46Q6P387 395 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 NEK5Q6P3R8 708 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 TADA2BQ86TJ2 420 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 APLFQ8IW19 511 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 RASEFQ8IZ41 740 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 ZNF295-AS1Q8N0V1 137 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 ARL10Q8N8L6 244 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 OR6C4Q8NGE1 309 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 BTN2A2Q8WVV5 523 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 MRGPRX3Q96LB0 322 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 BMFQ96LC9 184 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 MYOCQ99972 504 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 DDA1Q9BW61 102 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 DMAP1Q9NPF5 467 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 DDX19AQ9NUU7 478 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 SIX4Q9UIU6 781 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 PILRAQ9UKJ1 303 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 AGO2Q9UKV8 859 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 DNM3Q9UQ16 869 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 NAALADL1Q9UQQ1 740 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 KLF2Q9Y5W3 355 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 B3GALT1Q9Y5Z6 326 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 HS3ST3A1Q9Y663 406 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 STYXL1Q9Y6J8 313 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 NOTCH1P46531 2555 aa6.85□□□□□ -1.31
HERPUD1-217ENST00000569429 CHD5Q8TDI0 1954 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 LRP4O75096 1905 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 ITIH6Q6UXX5 1313 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 EDDM13A0A1B0GTR0 161 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 VWA3AA6NCI4 1184 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 KIAA1324LA8MWY0 1029 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 E9PMD0 336 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 AGRPO00253 132 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 HGSO14964 777 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 TACC1O75410 805 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 GCATO75600 419 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 IL1BP01584 269 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 ANXA6P08133 673 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 KRT19P08727 400 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PRR29P0C7W0 189 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 FGF3P11487 239 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PRLRP16471 622 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 XBP1P17861 261 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PMS2P54278 862 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 CLDN2P57739 230 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms