RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 KCTD15Q96SI1 283 aaPredicted RBP13.14□□□□□ -0.31
CDT1-203ENST00000569140 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CDT1-203ENST00000569140 C2orf49Q9BVC5 232 aaPredicted RBP13.14□□□□□ -0.31
CDT1-203ENST00000569140 PRDM16Q9HAZ2 1276 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDT1-203ENST00000569140 TMEM248Q9NWD8 314 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 CACNA1IQ9P0X4 2223 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 MUC22E2RYF6 1773 aaPredicted RBP13.14□□□□□ -0.31
CDT1-203ENST00000569140 WDFY4Q6ZS81 3184 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 ILVBLA1L0T0 632 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 H3BRJ5 948 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 DCLK1O15075 740 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
CDT1-203ENST00000569140 HRO43593 1189 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 RAMP2O60895 175 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 LILRB5O75023 590 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 PROSCO94903 275 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 TNNT1P13805 278 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 GLDCP23378 1020 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 IL1R2P27930 398 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 CNR2P34972 360 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 ETFBP38117 255 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 ARL4AP40617 200 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 PLK1P53350 603 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 LINGO4Q6UY18 593 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 NLRP14Q86W24 1093 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 RASSF3Q86WH2 238 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 NIPA2Q8N8Q9 360 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 RTL3Q8N8U3 475 aaKnown RBP13.13□□□□□ -0.31
CDT1-203ENST00000569140 DCAF4L2Q8NA75 395 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 ATP11CQ8NB49 1132 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 GANCQ8TET4 914 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 PRCCQ92733 491 aaPredicted RBP13.13□□□□□ -0.31
CDT1-203ENST00000569140 NELL1Q92832 810 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 MRGPRX3Q96LB0 322 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 PSMB7Q99436 277 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 TMEM245Q9H330 911 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 NDFIP2Q9NV92 336 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 KLHL11Q9NVR0 708 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 VPS51Q9UID3 782 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 HPCAL4Q9UM19 191 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 CYP8B1Q9UNU6 501 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 TFR2Q9UP52 801 aa13.13□□□□□ -0.31
CDT1-203ENST00000569140 SMG5Q9UPR3 1016 aaKnown RBP13.13□□□□□ -0.31
CDT1-203ENST00000569140 CCDC163A0A0D9SF12 145 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 EDDM13A0A1B0GTR0 161 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 RNASEH1O60930 286 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 SIN3BO75182 1162 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 NDUFA10O95299 355 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 LMNAP02545 664 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 RARAP10276 462 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 GOT1P17174 413 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 ACVRL1P37023 503 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 NAP1L1P55209 391 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 ENPP2Q13822 863 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 POLD3Q15054 466 aaPredicted RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 BOLA3Q53S33 107 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 KIAA1328Q86T90 577 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 TMPRSS6Q8IU80 811 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 PSTKQ8IV42 348 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 FAM160A2Q8N612 972 aaPredicted RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 OR2T3Q8NH03 318 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 ALG14Q96F25 216 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 SIPA1Q96FS4 1042 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 CELF6Q96J87 481 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 MRGPRX1Q96LB2 322 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 SEMA4AQ9H3S1 761 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 NCDNQ9UBB6 729 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 NEU3Q9UQ49 428 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 OR51B4Q9Y5P0 310 aa13.12□□□□□ -0.31
CDT1-203ENST00000569140 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
CDT1-203ENST00000569140 GFRA3O60609 400 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 DNTTP04053 509 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 VAV1P15498 845 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 HTR7P34969 479 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 PSMD8P48556 350 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 DNA2P51530 1060 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 CDH6P55285 790 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 GSDMDP57764 484 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 SLC25A11Q02978 314 aaKnown RBP13.11□□□□□ -0.31
CDT1-203ENST00000569140 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 CAMK2GQ13555 558 aaPredicted RBP13.11□□□□□ -0.31
CDT1-203ENST00000569140 ELF2Q15723 593 aa13.11□□□□□ -0.31
CDT1-203ENST00000569140 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms