RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 LOC110117498-PIK3R3F6TDL0 507 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 RNASEH1O60930 286 aaKnown RBP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 KLHL18O94889 574 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 CPSF4O95639 269 aaKnown RBP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 ITGB3P05106 788 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 RARBP10826 455 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 CYP2F1P24903 491 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 AKT1P31749 480 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 AP3M2P53677 418 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 C16orf86Q6ZW13 317 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 TPD52L3Q96J77 140 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 SLITRK1Q96PX8 696 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 H2AFY2Q9P0M6 372 aaPredicted RBP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 MRPS7Q9Y2R9 242 aaKnown RBP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 CCDC154A6NI56 674 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 M0QYT0 321 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 BBOX1O75936 387 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 H6PDO95479 791 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 S100A9P06702 114 aaKnown RBP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 CCNB1P14635 433 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 PTGS2P35354 604 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 PRIM2P49643 509 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 PITRM1Q5JRX3 1037 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 C11orf88Q6PI97 169 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 PODNQ7Z5L7 613 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 KCNMB4Q86W47 210 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 TMEM109Q9BVC6 243 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 AS3MTQ9HBK9 375 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 MRPL39Q9NYK5 338 aaKnown RBP13.54□□□□□ -0.24
UBFD1-207ENST00000567212 ZNF222Q9UK12 451 aa13.54□□□□□ -0.24
UBFD1-207ENST00000567212 CDC42BPGQ6DT37 1551 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PDLIM1O00151 329 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 FMO1Q01740 532 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 NCF4Q15080 339 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 TMEM119Q4V9L6 283 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 FAM196AQ6ZSG2 479 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 ERI1Q8IV48 349 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 OR8H1Q8NGG4 311 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 CNPY3Q9BT09 278 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 TRIM8Q9BZR9 551 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 H3BNX3 289 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 KCNQ2O43526 872 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 SYNCRIPO60506 623 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PDE9AO76083 593 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 TKTP29401 623 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 TALDO1P37837 337 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 C4orf22Q6V702 233 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 FGD2Q7Z6J4 655 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 BEST2Q8NFU1 509 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PTCD3Q96EY7 689 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 IRF2BPLQ9H1B7 796 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PLLPQ9Y342 182 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 ST14Q9Y5Y6 855 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 FBP2O00757 339 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 LTFP02788 710 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 MSLNQ13421 630 aaPredicted RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 STXBP2Q15833 593 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 ACOT1Q86TX2 421 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 TTC30BQ8N4P2 665 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 CCDC126Q96EE4 140 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PANX3Q96QZ0 392 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PCDHB18PQ96TA0 734 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 MMTAG2Q9BU76 263 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 CAB39LQ9H9S4 337 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 PRPF19Q9UMS4 504 aaKnown RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 COL3A1P02461 1466 aaPredicted RBP13.53□□□□□ -0.24
UBFD1-207ENST00000567212 NCANO14594 1321 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
UBFD1-207ENST00000567212 H0YGN5 161 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 EML1O00423 815 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 SOAT2O75908 522 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 PRLP01236 227 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 MPSTP25325 297 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 HALP42357 657 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 PTGIRP43119 386 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 GPSM2P81274 684 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 PRKCEQ02156 737 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 CYP24A1Q07973 514 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 MAMLD1Q13495 774 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 PRMT9Q6P2P2 845 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 POTEHQ6S545 545 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 SETD9Q8NE22 299 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 RASSF1Q9NS23 344 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 DAGLAQ9Y4D2 1042 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 GMEB1Q9Y692 573 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 NFS1Q9Y697 457 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 KAT6AQ92794 2004 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 ZC3H13Q5T200 1668 aaKnown RBP13.52□□□□□ -0.24
UBFD1-207ENST00000567212 HMBSP08397 361 aa13.52□□□□□ -0.24
UBFD1-207ENST00000567212 SLC2A4P14672 509 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms