RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 ARHGEF5Q12774 1597 aa6.22□□□□□ -1.41
KARS-208ENST00000566772 SOS1Q07889 1333 aaPredicted RBP6.22□□□□□ -1.41
KARS-208ENST00000566772 UBR1Q8IWV7 1749 aa6.22□□□□□ -1.41
KARS-208ENST00000566772 EIF2AK4Q9P2K8 1649 aaKnown RBP6.21□□□□□ -1.41
KARS-208ENST00000566772 ALKQ9UM73 1620 aa6.21□□□□□ -1.41
KARS-208ENST00000566772 LRRC7Q96NW7 1537 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 FRMD3A2A2Y4 597 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 TRIM24O15164 1050 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 HNRNPCL1O60812 293 aaKnown RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 ENTPD3O75355 529 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 PMPCBO75439 489 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 RPS6KA4O75676 772 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 CFIP05156 583 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 TGFB3P10600 412 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 CREB1P16220 341 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 EIF3BP55884 814 aaKnown RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 EFNB1P98172 346 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 DNASE1L3Q13609 305 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 SCARB2Q14108 478 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 ZNF667Q5HYK9 610 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 PLEKHS1Q5SXH7 462 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 NAIF1Q69YI7 327 aaPredicted RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 CDC73Q6P1J9 531 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 DENND5BQ6ZUT9 1274 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 DNAJB7Q7Z6W7 309 aaPredicted RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 BEND2Q8NDZ0 799 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 CNOT9Q92600 299 aaKnown RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 ARHGEF2Q92974 986 aaKnown RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 INTS12Q96CB8 462 aaKnown RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 KLHL29Q96CT2 875 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 RNF31Q96EP0 1072 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 KLHL15Q96M94 604 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 WDFY2Q96P53 400 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 HDHD5Q9BXW7 423 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 MAK16Q9BXY0 300 aaKnown RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 EPHX3Q9H6B9 360 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 KAT14Q9H8E8 782 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 SLC22A11Q9NSA0 550 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 MPP6Q9NZW5 540 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 MORF4L1Q9UBU8 362 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 EIF2B4Q9UI10 523 aaKnown RBP6.21□□□□□ -1.42
KARS-208ENST00000566772 MAP3K2Q9Y2U5 619 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 CHST2Q9Y4C5 530 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 MED14O60244 1454 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 ERVK-7P63135 1459 aa6.21□□□□□ -1.42
KARS-208ENST00000566772 BICDL2A1A5D9 508 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 PPP3CBP16298 524 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 ZNF37AP17032 561 aaPredicted RBP6.2□□□□□ -1.42
KARS-208ENST00000566772 CD72P21854 359 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 PRPH2P23942 346 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 ADRA1DP25100 572 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 GKP32189 559 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 LIPAP38571 399 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 ARL1P40616 181 aaPredicted RBP6.2□□□□□ -1.42
KARS-208ENST00000566772 UBXN2AP68543 259 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 AIMP1Q12904 312 aaKnown RBP6.2□□□□□ -1.42
KARS-208ENST00000566772 ALKBH1Q13686 389 aaKnown RBP6.2□□□□□ -1.42
KARS-208ENST00000566772 CRYMQ14894 314 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 RAB41Q5JT25 222 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 ADGRF2Q8IZF7 708 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 TOR1AIP2Q8NFQ8 470 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 OR52L2PQ8NGH6 319 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 GLMPQ8WWB7 406 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 RSPRY1Q96DX4 576 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 ZNF764Q96H86 408 aaPredicted RBP6.2□□□□□ -1.42
KARS-208ENST00000566772 HEMGNQ9BXL5 484 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 MEGF9Q9H1U4 602 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 CDCP1Q9H5V8 836 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 RETREG1Q9H6L5 497 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 TTC12Q9H892 705 aaPredicted RBP6.2□□□□□ -1.42
KARS-208ENST00000566772 ZWILCHQ9H900 591 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 GRPEL1Q9HAV7 217 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 INTS13Q9NVM9 706 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 HDAC6Q9UBN7 1215 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 FAM169AQ9Y6X4 670 aa6.2□□□□□ -1.42
KARS-208ENST00000566772 SCAF11Q99590 1463 aaKnown RBP6.2□□□□□ -1.42
KARS-208ENST00000566772 MROH1Q8NDA8 1641 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 C16orf96A6NNT2 1141 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 GRXCR1A8MXD5 290 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 BTBD18B2RXH4 712 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 DIRC3C9JPN6 131 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 GCOM1H8Y6P7 765 aaPredicted RBP6.19□□□□□ -1.42
KARS-208ENST00000566772 FYB1O15117 783 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 BCAT2O15382 392 aaPredicted RBP6.19□□□□□ -1.42
KARS-208ENST00000566772 SLC16A3O15427 465 aaKnown RBP6.19□□□□□ -1.42
KARS-208ENST00000566772 NOBOXO60393 691 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 OR2C1O95371 312 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 ALDOAP04075 364 aaKnown RBP6.19□□□□□ -1.42
KARS-208ENST00000566772 FESP07332 822 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 TMIGD3P0DMS9 266 aaPredicted RBP6.19□□□□□ -1.42
KARS-208ENST00000566772 JUNBP17275 347 aaPredicted RBP6.19□□□□□ -1.42
KARS-208ENST00000566772 CLCN2P51788 898 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 SLURP1P55000 103 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 OLR1P78380 273 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 PLIN5Q00G26 463 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 PPARDQ03181 441 aa6.19□□□□□ -1.42
KARS-208ENST00000566772 BYSLQ13895 437 aaKnown RBP6.19□□□□□ -1.42
KARS-208ENST00000566772 AP5B1Q2VPB7 878 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms