RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, human

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HACD3-208	ENST00000566239	VPS28	Q9UK41	221 aa		13.73	□□□□□ -0.21
HACD3-208	ENST00000566239	KNL1	Q8NG31	2342 aa		13.73	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3D	A0A087WVF3	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3I	A0A087WXS9	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3E	A0A087X179	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3K	A0A087X1G2	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3L	B9A6J9	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	C1QTNF3-AMACR	E9PGA6	284 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	KCNK3	O14649	394 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	SLC7A4	O43246	635 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TNFSF14	O43557	240 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3H	P0C7X1	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	PNMA6A	P0CW24	399 aa	Predicted RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	ZNF18	P17022	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	NUMB	P49757	651 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	SULT1E1	P49888	294 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	CDH4	P55283	916 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	RNASE9	P60153	205 aa	Known RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	KRT83	P78385	493 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	KCNJ12	Q14500	433 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	DRAP1	Q14919	205 aa	Predicted RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	DPCR1	Q3MIW9	517 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	HSP90AA4P	Q58FG1	418 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	MIIP	Q5JXC2	388 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3G	Q6DHY5	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3C	Q6IPX1	549 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	ERICH1	Q86X53	443 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	MSANTD4	Q8NCY6	345 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	FRS2	Q8WU20	508 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	C18orf8	Q96DM3	657 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	NPY6R	Q99463	290 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	FEM1A	Q9BSK4	669 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	TKTL2	Q9H0I9	626 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	MUC3B	Q9H195	1237 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	NUP62CL	Q9H1M0	184 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	KDM4C	Q9H3R0	1056 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	PIGV	Q9NUD9	493 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	BTBD3	Q9Y2F9	522 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.72	□□□□□ -0.21
HACD3-208	ENST00000566239	IGF2R	P11717	2491 aa		13.72	□□□□□ -0.21
HACD3-208	ENST00000566239		A0A1B0GTQ1	180 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	GOLGA8CP	A6NN73	597 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	ALOX15B	O15296	676 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	YKT6	O15498	198 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	ATP9B	O43861	1147 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	ATXN1L	P0C7T5	689 aa	Known RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	VAV1	P15498	845 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	CYP11B1	P15538	503 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	CDH5	P33151	784 aa	Predicted RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	NUDT1	P36639	197 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	SCNN1A	P37088	669 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	CXCR3	P49682	368 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	DEUP1	Q05D60	604 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	DLG2	Q15700	870 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	C5orf22	Q49AR2	442 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	KCNT1	Q5JUK3	1230 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	LRRC31	Q6UY01	552 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	PRPF39	Q86UA1	669 aa	Known RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	GALNT15	Q8N3T1	639 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	SH2D3C	Q8N5H7	860 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	ALG14	Q96F25	216 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	PGAP3	Q96FM1	320 aa	Predicted RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	SERAC1	Q96JX3	654 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	CCDC114	Q96M63	670 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	ELF4	Q99607	663 aa	Predicted RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	GDF3	Q9NR23	364 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	ARHGEF38	Q9NXL2	777 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	FTSJ1	Q9UET6	329 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	TBC1D30	Q9Y2I9	924 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	FHOD1	Q9Y613	1164 aa		13.71	□□□□□ -0.21
HACD3-208	ENST00000566239	ADAMTS20	P59510	1910 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	MYLK	Q15746	1914 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	MCF2L	O15068	1137 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	BNIP3L	O60238	219 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	LSM8	O95777	96 aa	Known RBP	13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	RHOC	P08134	193 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	EEF1G	P26641	437 aa	Known RBP	13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	DRD3	P35462	400 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	GGCX	P38435	758 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	GABRB2	P47870	512 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	ARRB1	P49407	418 aa	Predicted RBP	13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	IRAK1	P51617	712 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	IL9R	Q01113	521 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	SCAP	Q12770	1279 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	KCNMA1	Q12791	1236 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	SLC25A52	Q3SY17	297 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	KLHDC7A	Q5VTJ3	777 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	TMPRSS7	Q7RTY8	843 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	SETD3	Q86TU7	594 aa	Predicted RBP	13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	OR52K2	Q8NGK3	314 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	NT5C3B	Q969T7	300 aa		13.7	□□□□□ -0.22
HACD3-208	ENST00000566239	EBF2	Q9HAK2	575 aa		13.7	□□□□□ -0.22

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