RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 USP12O75317 370 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 COX7A2P14406 83 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 MARSP56192 900 aaKnown RBP13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 SKP1P63208 163 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 PURAQ00577 322 aaKnown RBP13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 GPSM1Q86YR5 675 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 CYP4X1Q8N118 509 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 SVOPQ8N4V2 548 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 KAZALD1Q96I82 304 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 OMDQ99983 421 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 UGT2B28Q9BY64 529 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 COQ6Q9Y2Z9 468 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 TRIM17Q9Y577 477 aa13.83□□□□□ -0.19
CX3CL1-204ENST00000565912 CLOCKO15516 846 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ATP9AO75110 1047 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 VIL1P09327 827 aaKnown RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 MAPTP10636 758 aaKnown RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 PECAM1P16284 738 aaPredicted RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 AXLP30530 894 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 PRKAG1P54619 331 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ACSM2AQ08AH3 577 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 FSCN1Q16658 493 aaKnown RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 TRMT5Q32P41 509 aaKnown RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 DDI2Q5TDH0 399 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ACSM2BQ68CK6 577 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 CDC73Q6P1J9 531 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 KCNT2Q6UVM3 1135 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 POU5F2Q8N7G0 328 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 GRIN3AQ8TCU5 1115 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ABHD16BQ9H3Z7 469 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 DMGDHQ9UI17 866 aaKnown RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 SLC9A8Q9Y2E8 581 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ACKR2O00590 384 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 TSPAN19P0C672 248 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 SERPINA4P29622 427 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 IFNGR2P38484 337 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ZSWIM7Q19AV6 140 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 USP45Q70EL2 814 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ACTRT2Q8TDY3 377 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 THAP1Q9NVV9 213 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 SOHLH2Q9NX45 425 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ZBTB22O15209 634 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 NFKB1P19838 968 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 BEX3Q00994 111 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 NEDD8Q15843 81 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ZCCHC23Q6ZST2 131 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 LPCAT2Q7L5N7 544 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ZSCAN18Q8TBC5 510 aaPredicted RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 GDPD5Q8WTR4 605 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 CLIP3Q96DZ5 547 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 APOPT1Q96IL0 206 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ADAM2Q99965 735 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 FUT8Q9BYC5 575 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 POPDC2Q9HBU9 364 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 CHKBQ9Y259 395 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 PTGES3LE9PB15 166 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 FCHO1O14526 889 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 OR6B1O95007 311 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 GJB6O95452 261 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 IFNA16P05015 189 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 DET1Q7L5Y6 550 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 ZBTB45Q96K62 511 aaPredicted RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 EPB41L4BQ9H329 900 aa13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 HMX1Q9NP08 348 aaPredicted RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 SEMA4BQ9NPR2 832 aaPredicted RBP13.83□□□□□ -0.2
CX3CL1-204ENST00000565912 CCDC189A1A4V9 331 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF24P17028 368 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 AMD1P17707 334 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ADCYAP1R1P41586 468 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 RXRGP48443 463 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ACVR2BQ13705 512 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF605Q86T29 641 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ULBP1Q9BZM6 244 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 POLR1EQ9GZS1 481 aaKnown RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 RNF208Q9H0X6 261 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 CLEC4MQ9H2X3 399 aaPredicted RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 INVSQ9Y283 1065 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 PPLO60437 1756 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 VPS4BO75351 444 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 BCL10O95999 233 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 HMGCRP04035 888 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 PRKAA2P54646 552 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 PTSQ03393 145 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 PRR23CQ6ZRP0 262 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 TMPRSS6Q8IU80 811 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ELMO1Q92556 727 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 OXNAD1Q96HP4 312 aaPredicted RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 KIAA1683Q9H0B3 1180 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 TRIT1Q9H3H1 467 aaKnown RBP13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 CATSPERZQ9NTU4 200 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 ENOPH1Q9UHY7 261 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 CXCL11O14625 94 aa13.82□□□□□ -0.2
CX3CL1-204ENST00000565912 SLITRK3O94933 977 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms