RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 HPGDP15428 266 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ZFXP17010 805 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 CYP2A7P20853 494 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PTX3P26022 381 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 CCR1P32246 355 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 LSP1P33241 339 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 EVI2BP34910 448 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 MAGEA1P43355 309 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PDE1AP54750 535 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 KCNQ4P56696 695 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 EIF4A1P60842 406 aaKnown RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 DSTNP60981 165 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 LIPEQ05469 1076 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CYP4F3Q08477 520 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 KCNC3Q14003 757 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 SSPNQ14714 243 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CNGA2Q16280 664 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TWISTNBQ3B726 338 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 C3orf36Q3SXR2 165 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 LRRC23Q53EV4 343 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 TMEM31Q5JXX7 168 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ARMC6Q6NXE6 501 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CEP85Q6P2H3 762 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 FAM173BQ6P4H8 233 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 NFRKBQ6P4R8 1299 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 SUSD1Q6UWL2 747 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 KCTD9Q7L273 389 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PLPPR4Q7Z2D5 763 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ADCK2Q7Z695 626 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ALYREFQ86V81 257 aaKnown RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 COMTD1Q86VU5 262 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 DNAAF5Q86Y56 855 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 SCYL3Q8IZE3 742 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TSPYL6Q8N831 410 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ANKRD44Q8N8A2 993 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 KDM1BQ8NB78 822 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 GPR150Q8NGU9 434 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 OR8K3Q8NH51 312 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PGAP3Q96FM1 320 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 ZSCAN10Q96SZ4 725 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 ATP6V0BQ99437 205 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 JPH2Q9BR39 696 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 LRRC3Q9BY71 257 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 USP44Q9H0E7 712 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 KLHL25Q9H0H3 589 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CHRDQ9H2X0 955 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 RIBC2Q9H4K1 309 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CCDC86Q9H6F5 360 aaKnown RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 ERVK-5Q9HDB9 667 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CENPMQ9NSP4 180 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 DECR2Q9NUI1 292 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 DNAJC11Q9NVH1 559 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CFAP97Q9P2B7 532 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ANKMY1Q9P2S6 941 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ARPP21Q9UBL0 812 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 HDAC6Q9UBN7 1215 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TRPS1Q9UHF7 1281 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CNOT7Q9UIV1 285 aaKnown RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 GMEB2Q9UKD1 530 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ZMYND8Q9ULU4 1186 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 AGAP1Q9UPQ3 857 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 HS3ST4Q9Y661 456 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CYP46A1Q9Y6A2 500 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 EVC2Q86UK5 1308 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 FLT4P35916 1363 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 A0A096LPE4 126 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 A0A1W2PPZ6 126 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 SYN3O14994 580 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ZNF185O15231 689 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 PHGDHO43175 533 aaKnown RBP3.15□□□□□ -1.9
CHD9-216ENST00000565803 CHMP2AO43633 222 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 VEGFDO43915 354 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ALDH1A2O94788 518 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 MBD3O95983 291 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 PRKCBP05771 671 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 UGT2B4P06133 528 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ZFYP08048 801 aaPredicted RBP3.15□□□□□ -1.9
CHD9-216ENST00000565803 FGF4P08620 206 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 UMPSP11172 480 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 RALBP11234 206 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ALADP13716 330 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ETS1P14921 441 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 SYN1P17600 705 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 NCF2P19878 526 aaPredicted RBP3.15□□□□□ -1.9
CHD9-216ENST00000565803 ENDOUP21128 410 aaKnown RBP3.15□□□□□ -1.9
CHD9-216ENST00000565803 SEC24CP53992 1094 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 MFAP4P55083 255 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 CDH8P55286 799 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 KDSRQ06136 332 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 UGT8Q16880 541 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ZSCAN23Q3MJ62 389 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 TCP11X2Q5H9J9 407 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 KHDC1LQ5JSQ8 128 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 CPZQ66K79 652 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ADALQ6DHV7 355 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ZNF600Q6ZNG1 722 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ANO5Q75V66 913 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.15□□□□□ -1.9
CHD9-216ENST00000565803 RHPN2Q8IUC4 686 aa3.15□□□□□ -1.9
CHD9-216ENST00000565803 CD302Q8IX05 232 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms