RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ATXN1LP0C7T5 689 aaKnown RBP24.43■■□□□ 1.5
RAB40C-209ENST00000565511 CYP11B1P15538 503 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 ERCC5P28715 1186 aaPredicted RBP24.43■■□□□ 1.5
RAB40C-209ENST00000565511 RNASE9P60153 205 aaKnown RBP24.43■■□□□ 1.5
RAB40C-209ENST00000565511 SLC12A1Q13621 1099 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 TEAD4Q15561 434 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 C5orf22Q49AR2 442 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 PRAMEF14Q5SWL7 426 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 NOP9Q86U38 636 aaKnown RBP24.43■■□□□ 1.5
RAB40C-209ENST00000565511 XYLT1Q86Y38 959 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 TBCBQ99426 244 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 FEM1AQ9BSK4 669 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 SIK2Q9H0K1 926 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 ARHGEF38Q9NXL2 777 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 TAB2Q9NYJ8 693 aa24.43■■□□□ 1.5
RAB40C-209ENST00000565511 FREM2Q5SZK8 3169 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 IL1BP01584 269 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 GOT1P17174 413 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 GABRB2P47870 512 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 CXCR3P49682 368 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 KLK7P49862 253 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 SULT1E1P49888 294 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 ELAVL3Q14576 367 aaKnown RBP24.42■■□□□ 1.5
RAB40C-209ENST00000565511 POM121L1PQ3SYA9 428 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 MARCH9Q86YJ5 346 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 NT5C3BQ969T7 300 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 FAM131CQ96AQ9 280 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 PSMB7Q99436 277 aa24.42■■□□□ 1.5
RAB40C-209ENST00000565511 ANKRD11Q6UB99 2663 aaPredicted RBP24.41■■□□□ 1.5
RAB40C-209ENST00000565511 A0A1W2PR77 199 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 TMEM8BA6NDV4 472 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 SRRM3A6NNA2 597 aaPredicted RBP24.41■■□□□ 1.5
RAB40C-209ENST00000565511 TAF4O00268 1085 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 FLRT2O43155 660 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 ATP9BO43861 1147 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 SNAP91O60641 907 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 ADH1BP00325 375 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 C5AR1P21730 350 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 FLT3P36888 993 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 RACK1P63244 317 aaKnown RBP24.41■■□□□ 1.5
RAB40C-209ENST00000565511 SHBQ15464 509 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 SMYD5Q6GMV2 418 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 Q6ZVU0 165 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 SND1Q7KZF4 910 aaKnown RBP eCLIP24.41■■□□□ 1.5
RAB40C-209ENST00000565511 OR14C36Q8NHC7 312 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 RHBDD1Q8TEB9 315 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 TKTL2Q9H0I9 626 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 GANQ9H2C0 597 aa24.41■■□□□ 1.5
RAB40C-209ENST00000565511 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.41■■□□□ 1.5
RAB40C-209ENST00000565511 LRRC72A6NJI9 287 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 RNF103O00237 685 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 PES1O00541 588 aaKnown RBP24.4■■□□□ 1.5
RAB40C-209ENST00000565511 VILLO15195 856 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 RTN2O75298 545 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 DKK1O94907 266 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 MT-CO1P00395 513 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 MMEP08473 750 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 UCHL3P15374 230 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 CCT8P50990 548 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 SULT2A1Q06520 285 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 RAB6CQ53S08 254 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 TCP11X2Q5H9J9 407 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 FAM102AQ5T9C2 384 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-209ENST00000565511 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-209ENST00000565511 ADAT2Q7Z6V5 191 aaKnown RBP24.4■■□□□ 1.5
RAB40C-209ENST00000565511 TMEM35BQ8NCS4 154 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 SLC20A1Q8WUM9 679 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 SPAG5Q96R06 1193 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 RAB6CQ9H0N0 254 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 VPS28Q9UK41 221 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 TBC1D30Q9Y2I9 924 aa24.4■■□□□ 1.5
RAB40C-209ENST00000565511 GOLGA4Q13439 2230 aaKnown RBP24.4■■□□□ 1.5
RAB40C-209ENST00000565511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.39■■□□□ 1.49
RAB40C-209ENST00000565511 GOLGA8CPA6NN73 597 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 F8VZ95 297 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 GOLGA8SH3BPF8 625 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 VASPP50552 380 aaPredicted RBP24.39■■□□□ 1.49
RAB40C-209ENST00000565511 CCR5P51681 352 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 ZNF177Q13360 481 aaPredicted RBP24.39■■□□□ 1.49
RAB40C-209ENST00000565511 DLG2Q15700 870 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 SH2D3CQ8N5H7 860 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 EPS8L1Q8TE68 723 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 PGAP3Q96FM1 320 aaPredicted RBP24.39■■□□□ 1.49
RAB40C-209ENST00000565511 LMBRD1Q9NUN5 540 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 MPP6Q9NZW5 540 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 APOBEC2Q9Y235 224 aaKnown RBP24.39■■□□□ 1.49
RAB40C-209ENST00000565511 APC2O95996 2303 aa24.39■■□□□ 1.49
RAB40C-209ENST00000565511 DSPP15924 2871 aaKnown RBP24.38■■□□□ 1.49
RAB40C-209ENST00000565511 K7ERQ8 282 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 EPHB6O15197 1021 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 PCDHGA12O60330 932 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 CLDN11O75508 207 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 CTSLP07711 333 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 SRCP12931 536 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 CDH4P55283 916 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 BPIFB4P59827 614 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 NOMO3P69849 1222 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 CNTN1Q12860 1018 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 AGBL4Q5VU57 503 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 CCNI2Q6ZMN8 369 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms