RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 GIPC1O14908 333 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 MAFGO15525 162 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 GABRB2P47870 512 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 BMXP51813 675 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 CYP2R1Q6VVX0 501 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 TMEM26Q6ZUK4 368 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 CCDC80Q76M96 950 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 SNX29P2Q8IUI4 249 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 ZNF786Q8N393 782 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 KYQ8NBH2 561 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 C17orf50Q8WW18 174 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 SLC7A3Q8WY07 619 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 TFAP2BQ92481 460 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 TRPV6Q9H1D0 765 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 DDX56Q9NY93 547 aaKnown RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 RLFQ13129 1914 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 DGAT1O75907 488 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 SERPINE1P05121 402 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 RALBP11234 206 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 ARSAP15289 507 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 CDH3P22223 829 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 RBL1P28749 1068 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 PRDX6P30041 224 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 CDK18Q07002 472 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 NME3Q13232 169 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 ITGADQ13349 1161 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 ZACNQ401N2 412 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 AARS2Q5JTZ9 985 aaKnown RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 LDLRAP1Q5SW96 308 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 CMC1Q7Z7K0 106 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 MTMR12Q9C0I1 747 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 STBD1O95210 358 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 C4BPAP04003 597 aaKnown RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 CD19P15391 556 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 STAT5BP51692 787 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 ABCE1P61221 599 aaKnown RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 XKR3Q5GH77 459 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 FAM219BQ5XKK7 198 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 LYSMD3Q7Z3D4 306 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 PCDH20Q8N6Y1 951 aaKnown RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 FBXL18Q96ME1 805 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 NOL11Q9H8H0 719 aaKnown RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 DNAJC28Q9NX36 388 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 GMPR2Q9P2T1 348 aaKnown RBP16.62■□□□□ 0.25
LINC00554-201ENST00000564841 HES2Q9Y543 173 aa16.62■□□□□ 0.25
LINC00554-201ENST00000564841 K7ERI5 159 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 NRP1O14786 923 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 CHRNGP07510 517 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 ZNF182P17025 639 aaPredicted RBP16.61■□□□□ 0.25
LINC00554-201ENST00000564841 MYL6P60660 151 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 CREB5Q02930 508 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 CES3Q6UWW8 571 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 SETD3Q86TU7 594 aaPredicted RBP16.61■□□□□ 0.25
LINC00554-201ENST00000564841 CARM1Q86X55 608 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 SNX31Q8N9S9 440 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 C20orf96Q9NUD7 363 aaPredicted RBP16.61■□□□□ 0.25
LINC00554-201ENST00000564841 TMEM132AQ24JP5 1023 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 DCLRE1AQ6PJP8 1040 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 PLD6Q8N2A8 252 aaKnown RBP16.61■□□□□ 0.25
LINC00554-201ENST00000564841 SLC15A4Q8N697 577 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 PNPLA8Q9NP80 782 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 GPATCH2LQ9NWQ4 482 aa16.61■□□□□ 0.25
LINC00554-201ENST00000564841 MCM3APO60318 1980 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 A0A0G2JLL6 359 aaPredicted RBP16.6■□□□□ 0.25
LINC00554-201ENST00000564841 APOC4-APOC2K7ER74 178 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 APOC2P02655 101 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 HMOX2P30519 316 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 PTPN7P35236 360 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 GJA5P36382 358 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 PPARGP37231 505 aaPredicted RBP16.6■□□□□ 0.25
LINC00554-201ENST00000564841 CDH8P55286 799 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 TFAMQ00059 246 aaKnown RBP16.6■□□□□ 0.25
LINC00554-201ENST00000564841 PMS2P3Q13401 168 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 BSPRYQ5W0U4 402 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 CASC4Q6P4E1 433 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 BTLAQ7Z6A9 289 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 PRRT2Q7Z6L0 340 aaPredicted RBP16.6■□□□□ 0.25
LINC00554-201ENST00000564841 NETO2Q8NC67 525 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 CASP10Q92851 521 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 RPF2Q9H7B2 306 aaKnown RBP16.6■□□□□ 0.25
LINC00554-201ENST00000564841 WDR41Q9HAD4 459 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 ADA2Q9NZK5 511 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 CYTH4Q9UIA0 394 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 PADI4Q9UM07 663 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 H3BMQ9 156 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 FAM189A1O60320 539 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 STAM2O75886 525 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 FARP2O94887 1054 aaPredicted RBP16.6■□□□□ 0.25
LINC00554-201ENST00000564841 JUNP05412 331 aaKnown RBP16.6■□□□□ 0.25
LINC00554-201ENST00000564841 KRT3P12035 628 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 CCDC130P13994 396 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 TSHRP16473 764 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 MIPP30301 263 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 GTF2A2P52657 109 aa16.6■□□□□ 0.25
LINC00554-201ENST00000564841 PSMC1P62191 440 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms