RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ERV3-1Q14264 604 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 RTN1Q16799 776 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 SV2CQ496J9 727 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 JADE1Q6IE81 842 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 MRGPRGQ86SM5 289 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 TMEM135Q86UB9 458 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 PARGQ86W56 976 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 TMEM86AQ8N2M4 240 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 CCDC112Q8NEF3 446 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 WFIKKN2Q8TEU8 576 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 ART4Q93070 314 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 FBXO32Q969P5 355 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 RILPL2Q969X0 211 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 RELTQ969Z4 430 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 MYLPFQ96A32 169 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 NACA2Q9H009 215 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 DIAPH3Q9NSV4 1193 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 CCM2LQ9NUG4 571 aaPredicted RBP11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 CHORDC1Q9UHD1 332 aaPredicted RBP11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 L1RE1Q9UN81 338 aa11.07□□□□□ -0.64
HDGFL3-204ENST00000563790 SPTY2D1-AS1A0A0U1RR47 76 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 C19orf84I3L1E1 186 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 PLRG1O43660 514 aaKnown RBP11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 ZDHHC11BP0C7U3 371 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 F8A1P23610 371 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 PCSK1P29120 753 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 CHKAP35790 457 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 STAT5AP42229 794 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 KRT83P78385 493 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 MCL1Q07820 350 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 IFRD2Q12894 506 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 CHRNA6Q15825 494 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 HNRNPA1L2Q32P51 320 aaKnown RBP11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 PLEKHN1Q494U1 663 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 CRB2Q5IJ48 1285 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 GCNT7Q6ZNI0 430 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 Q6ZSR6 202 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 ADIPOR2Q86V24 386 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 RHOT1Q8IXI2 618 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 PARP9Q8IXQ6 854 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 ZC3H3Q8IXZ2 948 aaKnown RBP11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 ARL10Q8N8L6 244 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 OR6C4Q8NGE1 309 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 TRIT1Q9H3H1 467 aaKnown RBP11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 ARHGAP28Q9P2N2 729 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 SPASTQ9UBP0 616 aa11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 COPG1Q9Y678 874 aaKnown RBP11.06□□□□□ -0.64
HDGFL3-204ENST00000563790 CHD5Q8TDI0 1954 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 ARID1AO14497 2285 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 SLC31A1O15431 190 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 SLC7A4O43246 635 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 SPRY1O43609 319 aaPredicted RBP11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 HCRTO43612 131 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 LY6G6DO95868 133 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 ANXA6P08133 673 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 PLCG1P19174 1290 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 HLA-FP30511 346 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 KIR3DL1P43629 444 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 PSMD8P48556 350 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 FOLH1Q04609 750 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 ZNF235Q14590 738 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 CHST9Q7L1S5 443 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 KDELC2Q7Z4H8 507 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 OSTM1Q86WC4 334 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 KYQ8NBH2 561 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 ACBD4Q8NC06 268 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 CCDC148Q8NFR7 591 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 MYO19Q96H55 970 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 DCLK3Q9C098 648 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 HAPLN2Q9GZV7 340 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 KMT5AQ9NQR1 393 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 TNFRSF10DQ9UBN6 386 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 GULP1Q9UBP9 304 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 NTNG1Q9Y2I2 539 aa11.05□□□□□ -0.64
HDGFL3-204ENST00000563790 E2F3O00716 465 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 GABRDO14764 452 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 CLDN3O15551 220 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 TLR5O60602 858 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 RTN3O95197 1032 aaPredicted RBP11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 ATP5BP06576 529 aaKnown RBP11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 PRLRP16471 622 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 HNRNPA2B1P22626 353 aaKnown RBP11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 ADKP55263 362 aaKnown RBP11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 CLDN2P57739 230 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 TMEM132DQ14C87 1099 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 CEBPEQ15744 281 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 DCAF12Q5T6F0 453 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 C9orf64Q5T6V5 341 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 OR6B2Q6IFH4 312 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 RINT1Q6NUQ1 792 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 SYNE3Q6ZMZ3 975 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 KIAA0907Q7Z7F0 614 aaPredicted RBP11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 CD302Q8IX05 232 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 BTN2A2Q8WVV5 523 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 TBATAQ96M53 351 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 TEFMQ96QE5 360 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms