RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 PRPF39Q86UA1 669 aaKnown RBP8.6□□□□□ -1.03
CKLF-208ENST00000563092 RNF139Q8WU17 664 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 IRGQQ8WZA9 623 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 SLC39A13Q96H72 371 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 FCRL2Q96LA5 508 aaPredicted RBP8.6□□□□□ -1.03
CKLF-208ENST00000563092 TMEM8AQ9HCN3 771 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 THSD1Q9NS62 852 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 GPR27Q9NS67 375 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 IL17BQ9UHF5 180 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 SARDHQ9UL12 918 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 FRMD4BQ9Y2L6 1034 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 PCDHGA8Q9Y5G5 932 aa8.6□□□□□ -1.03
CKLF-208ENST00000563092 NYNRINQ9P2P1 1898 aaKnown RBP8.6□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3DA0A087WVF3 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3IA0A087WXS9 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3EA0A087X179 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3KA0A087X1G2 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3FA6NER0 549 aaPredicted RBP8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3LB9A6J9 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 EFSO43281 561 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 RTN2O75298 545 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 PIAS2O75928 621 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 LUC7L3O95232 432 aaKnown RBP8.59□□□□□ -1.03
CKLF-208ENST00000563092 FYNP06241 537 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3HP0C7X1 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 PDIA4P13667 645 aaKnown RBP8.59□□□□□ -1.03
CKLF-208ENST00000563092 VAV1P15498 845 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
CKLF-208ENST00000563092 PLK1P53350 603 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 SLC8A3P57103 927 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TAS2R38P59533 333 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 BST2Q10589 180 aaKnown RBP8.59□□□□□ -1.03
CKLF-208ENST00000563092 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 NNTQ13423 1086 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 STK38Q15208 465 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 ARL13BQ3SXY8 428 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 MS4A13Q5J8X5 152 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 ZNF787Q6DD87 383 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3GQ6DHY5 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3CQ6IPX1 549 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TBC1D3Q8IZP1 549 aaPredicted RBP8.59□□□□□ -1.03
CKLF-208ENST00000563092 APCDD1Q8J025 514 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 UBR7Q8N806 425 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 EXD3Q8N9H8 876 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 SLC35F5Q8WV83 523 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 APOLD1Q96LR9 279 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 SPAG5Q96R06 1193 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 STARD5Q9NSY2 213 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 NLGN3Q9NZ94 848 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 TSPAN16Q9UKR8 245 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 PPM1HQ9ULR3 514 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
CKLF-208ENST00000563092 RELNP78509 3460 aa8.59□□□□□ -1.04
CKLF-208ENST00000563092 TLN1Q9Y490 2541 aaKnown RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 O00370 1275 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 SCAMP1O15126 338 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 ALOX15BO15296 676 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 ATP9BO43861 1147 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 IL1BP01584 269 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 SETSIPP0DME0 302 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 ITGB6P18564 788 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 RPL34P49207 117 aaKnown RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 STK19P49842 368 aaPredicted RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 TBX4P57082 545 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 DAB2P98082 770 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 CNTN1Q12860 1018 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 CLN3Q13286 438 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 EIF4EBP2Q13542 120 aaPredicted RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 SLC12A1Q13621 1099 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 CDH18Q13634 790 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 STAT4Q14765 748 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 GOLGA7BQ2TAP0 167 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 ZNF284Q2VY69 593 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 LINC00303Q3SY05 128 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 ZCWPW2Q504Y3 356 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 SETMARQ53H47 684 aaPredicted RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 DCAF6Q58WW2 860 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 KIAA1614Q5VZ46 1190 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 RESP18Q5W5W9 173 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 CEP135Q66GS9 1140 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 KRT39Q6A163 491 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 NEK5Q6P3R8 708 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 LCLAT1Q6UWP7 414 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 ABI3BPQ7Z7G0 1075 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 GRAMD1CQ8IYS0 662 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 FBXL13Q8NEE6 735 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 ALG14Q96F25 216 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 CCDC97Q96F63 343 aaPredicted RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 EEF2KMTQ96G04 330 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 KLHDC7BQ96G42 594 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 INTS4Q96HW7 963 aaKnown RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 IPO9Q96P70 1041 aaKnown RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 DDX50Q9BQ39 737 aaKnown RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 NUCKS1Q9H1E3 243 aaKnown RBP8.58□□□□□ -1.04
CKLF-208ENST00000563092 CAAP1Q9H8G2 361 aa8.58□□□□□ -1.04
CKLF-208ENST00000563092 LRRC4Q9HBW1 653 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms