RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 KLHL29Q96CT2 875 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 PGLYRP2Q96PD5 576 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 CPNE1Q99829 537 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 MECRQ9BV79 373 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 SLC39A8Q9C0K1 460 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 TXLNGQ9NUQ3 528 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 IL1RAPL1Q9NZN1 696 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 TXNDC16Q9P2K2 825 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 TLR6Q9Y2C9 796 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 HS3ST4Q9Y661 456 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 MAGEB16A2A368 324 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 OR6C75A6NL08 312 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 E9PAM4 449 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 AP3B1O00203 1094 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 ENPP3O14638 875 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 BIRC5O15392 142 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 MAFKO60675 156 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 NBNO60934 754 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 UNC5CO95185 931 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 MOCS2O96007 188 aaPredicted RBP10.01□□□□□ -0.81
SMG1-205ENST00000561947 TUBP50607 506 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 ANKRD20A4Q4UJ75 823 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 CERCAMQ5T4B2 595 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 GRTP1Q5TC63 336 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 FAM171A1Q5VUB5 890 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 AFMIDQ63HM1 303 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 ATG16L1Q676U5 607 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 ZNF280DQ6N043 979 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 KYAT3Q6YP21 454 aaKnown RBP10.01□□□□□ -0.81
SMG1-205ENST00000561947 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 OTOP3Q7RTS5 596 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 C14orf80Q86SX3 495 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 RTL3Q8N8U3 475 aaKnown RBP10.01□□□□□ -0.81
SMG1-205ENST00000561947 RAB3IL1Q8TBN0 382 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 E2F7Q96AV8 911 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 SLC39A13Q96H72 371 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 IL12RB2Q99665 862 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 APOL2Q9BQE5 337 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 IL22Q9GZX6 179 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 GMIPQ9P107 970 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 DCTN4Q9UJW0 460 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 SOX13Q9UN79 622 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 PCDHB7Q9Y5E2 793 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 DOCK4Q8N1I0 1966 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 ZCWPW2A0A1B0GU75 182 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 WASH4PA8MWX3 477 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 ATP9BO43861 1147 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 GLRA3O75311 464 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 ATP5HO75947 161 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 BPGMP07738 259 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 DNAJB2P25686 324 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 USP46P62068 366 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 KCNJ2P63252 427 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 CDH17Q12864 832 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 BFSP2Q13515 415 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 PDE1CQ14123 709 aaPredicted RBP10.01□□□□□ -0.81
SMG1-205ENST00000561947 GPNMBQ14956 572 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 SMAD1Q15797 465 aaKnown RBP10.01□□□□□ -0.81
SMG1-205ENST00000561947 DBN1Q16643 649 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 SPDYAQ5MJ70 313 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 LINC00523Q86TU6 105 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 CEP57Q86XR8 500 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 NUDCD3Q8IVD9 361 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 DBF4BQ8NFT6 615 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 C1orf74Q96LT6 269 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 CASD1Q96PB1 797 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 FCRL5Q96RD9 977 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMG1-205ENST00000561947 NDFIP2Q9NV92 336 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 IL37Q9NZH6 218 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 UBP1Q9NZI7 540 aa10.01□□□□□ -0.81
SMG1-205ENST00000561947 AAR2Q9Y312 384 aaKnown RBP10.01□□□□□ -0.81
SMG1-205ENST00000561947 MATN3O15232 486 aa10□□□□□ -0.81
SMG1-205ENST00000561947 MGRN1O60291 552 aa10□□□□□ -0.81
SMG1-205ENST00000561947 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
SMG1-205ENST00000561947 SLC2A3P11169 496 aa10□□□□□ -0.81
SMG1-205ENST00000561947 FGFR3P22607 806 aa10□□□□□ -0.81
SMG1-205ENST00000561947 GATMP50440 423 aa10□□□□□ -0.81
SMG1-205ENST00000561947 ARFIP2P53365 341 aa10□□□□□ -0.81
SMG1-205ENST00000561947 MLLT6P55198 1093 aaPredicted RBP10□□□□□ -0.81
SMG1-205ENST00000561947 TBX4P57082 545 aa10□□□□□ -0.81
SMG1-205ENST00000561947 TMPRSS15P98073 1019 aa10□□□□□ -0.81
SMG1-205ENST00000561947 PDE1BQ01064 536 aa10□□□□□ -0.81
SMG1-205ENST00000561947 BST1Q10588 318 aa10□□□□□ -0.81
SMG1-205ENST00000561947 CHI3L2Q15782 390 aa10□□□□□ -0.81
SMG1-205ENST00000561947 PIK3R6Q5UE93 754 aa10□□□□□ -0.81
SMG1-205ENST00000561947 TIGD7Q6NT04 549 aaPredicted RBP10□□□□□ -0.81
SMG1-205ENST00000561947 PARP9Q8IXQ6 854 aa10□□□□□ -0.81
SMG1-205ENST00000561947 TTC9BQ8N6N2 239 aa10□□□□□ -0.81
SMG1-205ENST00000561947 ATAD1Q8NBU5 361 aa10□□□□□ -0.81
SMG1-205ENST00000561947 C7orf26Q96N11 449 aa10□□□□□ -0.81
SMG1-205ENST00000561947 RBBP8Q99708 897 aa10□□□□□ -0.81
SMG1-205ENST00000561947 GPR62Q9BZJ7 368 aa10□□□□□ -0.81
SMG1-205ENST00000561947 GLOD4Q9HC38 313 aa10□□□□□ -0.81
SMG1-205ENST00000561947 ARHGEF3Q9NR81 526 aa10□□□□□ -0.81
SMG1-205ENST00000561947 MARCH5Q9NX47 278 aa10□□□□□ -0.81
SMG1-205ENST00000561947 FNIP2Q9P278 1114 aa10□□□□□ -0.81
SMG1-205ENST00000561947 ZFP69BQ9UJL9 534 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms