RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SNRPAP09012 282 aaKnown RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 PTPRAP18433 802 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 NSFP46459 744 aaKnown RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 APLP1P51693 650 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 GNG2P59768 71 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 CTAG1AP78358 180 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 OCA2Q04671 838 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 EIF2B5Q13144 721 aaKnown RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 LDLRAD1Q5T700 205 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 LGSNQ5TDP6 509 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 ANKRD13AQ8IZ07 590 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 SLC38A6Q8IZM9 456 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 PDIK1LQ8N165 341 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 TTC30BQ8N4P2 665 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 UBR7Q8N806 425 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 NKD2Q969F2 451 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 ZNF778Q96MU6 729 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 NACC1Q96RE7 527 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 VRTNQ9H8Y1 702 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 POLR1BQ9H9Y6 1135 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 SLC38A10Q9HBR0 1119 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 AGO2Q9UKV8 859 aaKnown RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 ST14Q9Y5Y6 855 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 BRCA2P51587 3418 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 K7ENM7 598 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 CDK2AP1O14519 115 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 PRKCAP17252 672 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 RFC1P35251 1148 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 SLC26A11Q86WA9 606 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 SIAH1Q8IUQ4 282 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 KYQ8NBH2 561 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 CDRT15Q96T59 188 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 NAA50Q9GZZ1 169 aaKnown RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 GLT8D2Q9H1C3 349 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 IPO11Q9UI26 975 aaKnown RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 ARIH1Q9Y4X5 557 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 ZSCAN5BA6NJL1 495 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 KBTBD13C9JR72 458 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 CHMP2AO43633 222 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 GABBR2O75899 941 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 KRT3P12035 628 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 M6PRP20645 277 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 ME2P23368 584 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 ELK3P41970 407 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 NUDT2P50583 147 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 C1QTNF8P60827 252 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 C15orf59Q2T9L4 293 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 QRICH1Q2TAL8 776 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 MON1BQ7L1V2 547 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 ZBTB46Q86UZ6 589 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 LSMEM1Q8N8F7 131 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 SH3YL1Q96HL8 342 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 FBXL18Q96ME1 805 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 MMP19Q99542 508 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 C11orf70Q9BRQ4 267 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 HSPBP1Q9NZL4 362 aa18.98■□□□□ 0.63
RAB40C-206ENST00000561781 NXF1Q9UBU9 619 aaKnown RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 XPO7Q9UIA9 1087 aaKnown RBP18.98■□□□□ 0.63
RAB40C-206ENST00000561781 UNCXA6NJT0 531 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 ZC3H11AO75152 810 aaKnown RBP eCLIP18.97■□□□□ 0.63
RAB40C-206ENST00000561781 WEE2P0C1S8 567 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 ZNF157P51786 506 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-206ENST00000561781 STX1BP61266 288 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 PHC1P78364 1004 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 MAMLD1Q13495 774 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 MAPRE1Q15691 268 aaKnown RBP18.97■□□□□ 0.63
RAB40C-206ENST00000561781 PGS1Q32NB8 556 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 BOLA3Q53S33 107 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 SPOCD1Q6ZMY3 1216 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 PLEKHG7Q6ZR37 379 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 CYP4V2Q6ZWL3 525 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-206ENST00000561781 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 XXYLT1Q8NBI6 393 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 RASSF5Q8WWW0 418 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 TFAP2CQ92754 450 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 ACSF2Q96CM8 615 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-206ENST00000561781 DHRS9Q9BPW9 319 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 ZBED2Q9BTP6 218 aa18.97■□□□□ 0.63
RAB40C-206ENST00000561781 SAE1Q9UBE0 346 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-206ENST00000561781 PLOD2O00469 737 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 DCXO43602 365 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 LYPLA1O75608 230 aaPredicted RBP18.96■□□□□ 0.63
RAB40C-206ENST00000561781 GRK2P25098 689 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 KLF10Q13118 480 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 AP3B2Q13367 1082 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 INAVAQ3KP66 663 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 CDONQ4KMG0 1287 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 NHSL2Q5HYW2 709 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 GJC2Q5T442 439 aaPredicted RBP18.96■□□□□ 0.63
RAB40C-206ENST00000561781 CLIP4Q8N3C7 705 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 OSCP1Q8WVF1 389 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 KLHL32Q96NJ5 620 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 NT5C1BQ96P26 610 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 DNMT3BQ9UBC3 853 aaKnown RBP18.96■□□□□ 0.63
RAB40C-206ENST00000561781 PSME2Q9UL46 239 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 GOLGA8IPA6NC78 632 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 GOLGA8JA6NMD2 632 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 PMM2O15305 246 aa18.96■□□□□ 0.63
RAB40C-206ENST00000561781 TLR3O15455 904 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms