RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 FAM87AP0C7U9 286 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 PRLRP16471 622 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 GCLMP48507 274 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC11A2P49281 568 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 DAOAP59103 153 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 TLE1Q04724 770 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 PPP3CAQ08209 521 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 STK4Q13043 487 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 CUL4BQ13620 913 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 TGIF1Q15583 401 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 CDKN3Q16667 212 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 DCAF6Q58WW2 860 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 MS4A13Q5J8X5 152 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 PERM1Q5SV97 790 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 NUGGCQ68CJ6 796 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 MSANTD2Q6P1R3 559 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 GUSBP11Q6P575 273 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 CRTC1Q6UUV9 634 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 USP53Q70EK8 1073 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 OR13H1Q8NG92 308 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 WDR36Q8NI36 951 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 GOLGA5Q8TBA6 731 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 FRS2Q8WU20 508 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 SGF29Q96ES7 293 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 IPO9Q96P70 1041 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 SPAG5Q96R06 1193 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 DUSP23Q9BVJ7 150 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 CALN1Q9BXU9 219 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 IMPG2Q9BZV3 1241 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 KCTD10Q9H3F6 313 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 LRRC4Q9HBW1 653 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 FZD3Q9NPG1 666 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 CEP83Q9Y592 693 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 ANKRD36A6QL64 1941 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 PVALEFA0A1B0GWK0 134 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 EME2A4GXA9 379 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CLEC18AA5D8T8 446 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 GJB6O95452 261 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 NR3C1P04150 777 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 ITGA2BP08514 1039 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 TRIM49P0CI25 452 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 TRIM49CP0CI26 452 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 LCP1P13796 627 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CR2P20023 1033 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC5A2P31639 672 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 MLLT3P42568 568 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 VAMP7P51809 220 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 PDX1P52945 283 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 TBX4P57082 545 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC8A3P57103 927 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CLDN2P57739 230 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 ZNF177Q13360 481 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CDH18Q13634 790 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 DRAP1Q14919 205 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 GOLGA7BQ2TAP0 167 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 RNF219Q5W0B1 726 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CEP135Q66GS9 1140 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 ZCCHC8Q6NZY4 707 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CLEC18BQ6UXF7 455 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 GCNT7Q6ZNI0 430 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 RBM44Q6ZP01 1051 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 EFL1Q7Z2Z2 1120 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 SCML4Q8N228 414 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 IQUBQ8NA54 791 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CLEC18CQ8NCF0 446 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 KIAA0895Q8NCT3 520 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 UBA3Q8TBC4 463 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 KCTD13Q8WZ19 329 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 SEMA4DQ92854 862 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 IFT43Q96FT9 208 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 FCRL2Q96LA5 508 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 DNAI2Q9GZS0 605 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 CISHQ9NSE2 258 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 WDR70Q9NW82 654 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 DNAJC28Q9NX36 388 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 KLF15Q9UIH9 416 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 TSPAN16Q9UKR8 245 aa9.22□□□□□ -0.93
RABGGTA-217ENST00000560521 SPTAN1Q13813 2472 aaKnown RBP9.21□□□□□ -0.93
RABGGTA-217ENST00000560521 CCDC187A0A096LP49 1063 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 A0A1W2PQU0 124 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 TYW5A2RUC4 315 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 PDXKO00764 312 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 KLRC4O43908 158 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 TCEA3O75764 348 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 NNMTP40261 264 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 NASPP49321 788 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 INHBCP55103 352 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 HNRNPKP61978 463 aaKnown RBP eCLIP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 BST2Q10589 180 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 TBR1Q16650 682 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 ZNF284Q2VY69 593 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 PIP5KL1Q5T9C9 394 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 FAM46CQ5VWP2 391 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 SHC4Q6S5L8 630 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms