RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 IP6K2Q9UHH9 426 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 SFMBT1Q9UHJ3 866 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 CDH22Q9UJ99 828 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 GNPTGQ9UJJ9 305 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 ADAMTS6Q9UKP5 1117 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 APOBEC2Q9Y235 224 aaKnown RBP6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 POMPQ9Y244 141 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 B3GNT3Q9Y2A9 372 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 TMEM98Q9Y2Y6 226 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 PLLPQ9Y342 182 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 AP4B1Q9Y6B7 739 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 IKBKGQ9Y6K9 419 aa6.12□□□□□ -1.43
SNRPA1-209ENST00000560307 GAKO14976 1311 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 MYPNQ86TC9 1320 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 hCG_1818297A0A087WSY0 165 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 A0A0B4J269 797 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 FAM237BA0A1B0GVD1 139 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 HTR3EA5X5Y0 456 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TMEM247A6NEH6 219 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CCDC160A6NGH7 325 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 ARHGAP42A6NI28 874 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TRDMT1O14717 391 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CYP26A1O43174 497 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SUPT3HO75486 399 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PPM1BO75688 479 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 KRT37O76014 449 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PGM3O95394 542 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CRTAMO95727 393 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SNRPAP09012 282 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SRGAP2CP0DJJ0 459 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SRGAP2BP0DMP2 458 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 ATF3P18847 181 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 S100A1P23297 94 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 ADSLP30566 484 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 HOXD12P35452 270 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CPA2P48052 419 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PRELPP51888 382 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 HK2P52789 917 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 NLRP11P59045 1033 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PSMC6P62333 389 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SUMO1P63165 101 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 MYBPC1Q00872 1141 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 GABPAQ06546 454 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PPP3CAQ08209 521 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 BST1Q10588 318 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 STX3Q13277 289 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TUBB3Q13509 450 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TFDP1Q14186 410 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 FASTKD3Q14CZ7 662 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CNGA3Q16281 694 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CLPPQ16740 277 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 GRAMD1BQ3KR37 738 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 C1orf220Q5T0J3 134 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 METTL21CQ5VZV1 264 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 LPCAT4Q643R3 524 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PLA2G4FQ68DD2 849 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PLEKHA7Q6IQ23 1121 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 NIPAL1Q6NVV3 410 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SPOCD1Q6ZMY3 1216 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TIFABQ6ZNK6 161 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 MON1BQ7L1V2 547 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 POLNQ7Z5Q5 900 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 RNF180Q86T96 592 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 LRRTM3Q86VH5 581 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SLC26A11Q86WA9 606 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CPNE8Q86YQ8 564 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PALM2Q8IXS6 379 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PDIK1LQ8N165 341 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 NIPA2Q8N8Q9 360 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 MINDY2Q8NBR6 621 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 KCT2Q8NC54 265 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SLC44A5Q8NCS7 719 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 GSTCDQ8NEC7 633 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CEP70Q8NHQ1 597 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 ZNF420Q8TAQ5 688 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SLC35B2Q8TB61 432 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 ACMSDQ8TDX5 336 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SLC26A7Q8TE54 656 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 ADAMTS16Q8TE57 1224 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TGFBRAP1Q8WUH2 860 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CYB5D2Q8WUJ1 264 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 EME1Q96AY2 570 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 EFHD2Q96C19 240 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 LRRC39Q96DD0 335 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 DNAJC1Q96KC8 554 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 CNDP2Q96KP4 475 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 SLITRK1Q96PX8 696 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 FAM111AQ96PZ2 611 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TSPAN18Q96SJ8 248 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 OLFM1Q99784 485 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 HSD17B14Q9BPX1 270 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 RTKNQ9BST9 563 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 MRPL1Q9BYD6 325 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 WDR11Q9BZH6 1224 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TMEM117Q9H0C3 514 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 PRDM11Q9NQV5 511 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 INIPQ9NRY2 104 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 THAP1Q9NVV9 213 aa6.11□□□□□ -1.43
SNRPA1-209ENST00000560307 TMEM9Q9P0T7 183 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms