RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SLCO1B1Q9Y6L6 691 aa6.09□□□□□ -1.43
USP3-212ENST00000559276 DUSP10Q9Y6W6 482 aa6.09□□□□□ -1.43
USP3-212ENST00000559276 CACNA1EQ15878 2313 aa6.09□□□□□ -1.43
USP3-212ENST00000559276 ZFYVE26Q68DK2 2539 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SMG1Q96Q15 3661 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 GOLGA6L10A0A0M3HER8 536 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 GTPBP10A4D1E9 387 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 CFAP73A6NFT4 308 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 PGRMC1O00264 195 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 CLGNO14967 610 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SH3BP5O60239 455 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CBFA2T3O75081 653 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 GABBR2O75899 941 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 IGLV3-19P01714 112 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 KRT14P02533 472 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 GLI1P08151 1106 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 C7P10643 843 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CD58P19256 250 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 PRKCHP24723 683 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 PRKCIP41743 596 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 PIK3CAP42336 1068 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 DPP6P42658 865 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 IL12RB1P42701 662 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CARSP49589 748 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 VAMP7P51809 220 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 COPAP53621 1224 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 RAD23BP54727 409 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SLC8A3P57103 927 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 PPP2R2AP63151 447 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SIM1P81133 766 aaPredicted RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 GUCY2DQ02846 1103 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 GFPT1Q06210 699 aaPredicted RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 XRCC4Q13426 336 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 BYSLQ13895 437 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 CRYMQ14894 314 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 RPS6KA1Q15418 735 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SNCBQ16143 134 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 TDRD12Q587J7 1177 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 C10orf120Q5SQS8 335 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 FBXW10Q5XX13 1052 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SLC36A4Q6YBV0 504 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 METTL3Q86U44 580 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 FAM217AQ8IXS0 508 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 RASGEF1CQ8N431 466 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CHCHD4Q8N4Q1 142 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 ANKS4BQ8N8V4 417 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SLC4A11Q8NBS3 891 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CEP76Q8TAP6 659 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 SORCS1Q8WY21 1168 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 DNASE2BQ8WZ79 361 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 NDRG1Q92597 394 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 TATDN2Q93075 761 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CCDC114Q96M63 670 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 RUNDC3BQ96NL0 473 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 GTPBP2Q9BX10 602 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 NT5C1AQ9BXI3 368 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 DUSP16Q9BY84 665 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 NIF3L1Q9GZT8 377 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 NACA2Q9H009 215 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 NSRP1Q9H0G5 558 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 RAB17Q9H0T7 212 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CCDC134Q9H6E4 229 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 CYP3A43Q9HB55 503 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 IL21RQ9HBE5 538 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 ITM2CQ9NQX7 267 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 BATF3Q9NR55 127 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 FAM207AQ9NSI2 230 aaPredicted RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.08□□□□□ -1.44
USP3-212ENST00000559276 WSB2Q9NYS7 404 aaPredicted RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 CLIC5Q9NZA1 410 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 THAP10Q9P2Z0 257 aaPredicted RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 MCM8Q9UJA3 840 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 DNMT3LQ9UJW3 386 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 NAGPAQ9UK23 515 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 AGO1Q9UL18 857 aaKnown RBP6.08□□□□□ -1.44
USP3-212ENST00000559276 NFU1Q9UMS0 254 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 STON1Q9Y6Q2 735 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 TMEM131Q92545 1883 aa6.08□□□□□ -1.44
USP3-212ENST00000559276 TMEM8BA6NDV4 472 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 FAM187AA6NFU0 413 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 E7EVH7 732 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 OPHN1O60890 802 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 ZNF217O75362 1048 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 PALMO75781 387 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 HMBSP08397 361 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 NUDT17P0C025 328 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 P4HA1P13674 534 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 NR2F2P24468 414 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 CD6P30203 668 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 CORO1AP31146 461 aaKnown RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 CTNNA1P35221 906 aaKnown RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 HSD17B3P37058 310 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 TPMTP51580 245 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 SGSHP51688 502 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 DRG2P55039 364 aaKnown RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 SLC7A5Q01650 507 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 RING1Q06587 406 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 ENPEPQ07075 957 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 KLHL30Q0D2K2 578 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms