RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SLCO3A1Q9UIG8 710 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 FBXO4Q9UKT5 387 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 ERVW-1Q9UQF0 538 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 ADGRG1Q9Y653 693 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 TNRC6BQ9UPQ9 1833 aaKnown RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 ILVBLA1L0T0 632 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 TYW5A2RUC4 315 aaKnown RBP11.73□□□□□ -0.53
SNX1-204ENST00000559061 GRID2IPA4D2P6 1211 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 BTNL10A8MVZ5 291 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 K7ERQ8 282 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 LAMTOR5O43504 91 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 LILRB5O75023 590 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 RHOCP08134 193 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 HOXB2P14652 356 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 GABRG2P18507 467 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 COMTP21964 271 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 EPHB2P29323 1055 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 OR1E1P30953 314 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 HOXA6P31267 233 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 MAPKAPK2P49137 400 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 FNTBP49356 437 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 MRE11P49959 708 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 COPAP53621 1224 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 GNA12Q03113 381 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 SRSF5Q13243 272 aaKnown RBP11.73□□□□□ -0.53
SNX1-204ENST00000559061 DPYSL3Q14195 570 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 HSF5Q4G112 596 aaPredicted RBP11.73□□□□□ -0.53
SNX1-204ENST00000559061 RWDD4Q6NW29 188 aaKnown RBP11.73□□□□□ -0.53
SNX1-204ENST00000559061 LRRC31Q6UY01 552 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 RFX8Q6ZV50 586 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 CHPFQ8IZ52 775 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 ZBTB44Q8NCP5 570 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 RAPGEF5Q92565 580 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 ARHGEF2Q92974 986 aaKnown RBP11.73□□□□□ -0.53
SNX1-204ENST00000559061 EXOC4Q96A65 974 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 ACDQ96AP0 544 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 FAF2Q96CS3 445 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 RPL10LQ96L21 214 aaKnown RBP11.73□□□□□ -0.53
SNX1-204ENST00000559061 CSPG4P5Q96PW8 444 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 FAM86C1Q9NVL1 165 aa11.73□□□□□ -0.53
SNX1-204ENST00000559061 TTC34A8MYJ7 566 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 EEF2KO00418 725 aaKnown RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 SMAD6O43541 496 aaKnown RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 TIMM44O43615 452 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 BUB1O43683 1085 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 ERCC2P18074 760 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 NDUFV2P19404 249 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 AMPD1P23109 780 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 HCAR3P49019 387 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 TPI1P60174 286 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 CAMK2GQ13555 558 aaPredicted RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 SLC12A1Q13621 1099 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 SPA17Q15506 151 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 ZNF528Q3MIS6 628 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 PREPLQ4J6C6 727 aaPredicted RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 BOLA3Q53S33 107 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 PPP6R3Q5H9R7 873 aaPredicted RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 EOGTQ5NDL2 527 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 C11orf63Q6NUN7 778 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 LINGO4Q6UY18 593 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 ZNF783Q6ZMS7 281 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 ARHGAP36Q6ZRI8 547 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 UMODL1-AS1Q8N2C9 162 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 PQLC3Q8N755 202 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 FRMD1Q8N878 549 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 ZNF557Q8N988 423 aaPredicted RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 DCAF4L2Q8NA75 395 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 KRT35Q92764 455 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 HMCESQ96FZ2 354 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 EPAS1Q99814 870 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 MKRN2Q9H000 416 aaKnown RBP11.72□□□□□ -0.53
SNX1-204ENST00000559061 PDFQ9HBH1 243 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 PRSS16Q9NQE7 514 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 EBF1Q9UH73 591 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 CAPN6Q9Y6Q1 641 aa11.72□□□□□ -0.53
SNX1-204ENST00000559061 SHROOM3Q8TF72 1996 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 TCRBV21S2A2A0A5A6 115 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 ATP9BO43861 1147 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 ATG13O75143 517 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 ASLP04424 464 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 SRPRAP08240 638 aaKnown RBP11.71□□□□□ -0.53
SNX1-204ENST00000559061 SRCP12931 536 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 POLR2EP19388 210 aaKnown RBP11.71□□□□□ -0.53
SNX1-204ENST00000559061 HTR7P34969 479 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 GJC1P36383 396 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 METAP1P53582 386 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 ECT2LQ008S8 904 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 GSE1Q14687 1217 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 TAZQ16635 292 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.53
SNX1-204ENST00000559061 C6orf118Q5T5N4 469 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 C9orf64Q5T6V5 341 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 HEATR6Q6AI08 1181 aaKnown RBP11.71□□□□□ -0.53
SNX1-204ENST00000559061 ANO7Q6IWH7 933 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 SH2D3CQ8N5H7 860 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 PCDH19Q8TAB3 1148 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 PTPRN2Q92932 1015 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 ZNF419Q96HQ0 510 aaPredicted RBP11.71□□□□□ -0.53
SNX1-204ENST00000559061 CELF6Q96J87 481 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms