RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 HNRNPA1P09651 372 aaKnown RBP eCLIP6.59□□□□□ -1.35
CLPX-202ENST00000558103 SP9P0CG40 484 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 HOXA9P31269 272 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 KRT2P35908 639 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 SCAND1P57086 179 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 NTHL1P78549 312 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 PSMD5Q16401 504 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 CALCRLQ16602 461 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 FAM187BQ17R55 369 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 SPECC1Q5M775 1068 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 DCLRE1AQ6PJP8 1040 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 PARM1Q6UWI2 310 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 GRASPQ7Z6J2 395 aaPredicted RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 DDX42Q86XP3 938 aaKnown RBP eCLIP6.59□□□□□ -1.35
CLPX-202ENST00000558103 SPATS2Q86XZ4 545 aaKnown RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 C1orf210Q8IVY1 113 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 PIGOQ8TEQ8 1089 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 HASPINQ8TF76 798 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 RMDN1Q96DB5 314 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 AHCYL2Q96HN2 611 aaKnown RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 MTMR9Q96QG7 549 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 ENKD1Q9H0I2 346 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 CXCL16Q9H2A7 254 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 FZD8Q9H461 694 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 PDZD7Q9H5P4 517 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 TTC12Q9H892 705 aaPredicted RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 PRMT7Q9NVM4 692 aaPredicted RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 TCHHQ07283 1943 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 LRRIQ4A6NIV6 560 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 ALG1L2C9J202 215 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 TMEM189-UBE2V1I3L0A0 370 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 ADAM12O43184 909 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 NEMFO60524 1076 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 TADA2AO75478 443 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 RECQL4O94761 1208 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 PRKD3O94806 890 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 LARGE1O95461 756 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 LTA4HP09960 611 aaKnown RBP6.58□□□□□ -1.36
CLPX-202ENST00000558103 XRCC6P12956 609 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLPX-202ENST00000558103 GPC5P78333 572 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 SPIDRQ14159 915 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLPX-202ENST00000558103 C19orf54Q5BKX5 351 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 FKBP15Q5T1M5 1219 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 LIN9Q5TKA1 542 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 CATSPER3Q86XQ3 398 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 GSPT2Q8IYD1 628 aaKnown RBP6.58□□□□□ -1.36
CLPX-202ENST00000558103 SUMF1Q8NBK3 374 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 MCPH1Q8NEM0 835 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 WASF1Q92558 559 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 FGF13Q92913 245 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 EXTL1Q92935 676 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 GTF3C6Q969F1 213 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 MIEF2Q96C03 454 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 CCDC43Q96MW1 224 aaKnown RBP6.58□□□□□ -1.36
CLPX-202ENST00000558103 TTPALQ9BTX7 342 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 TUFT1Q9NNX1 390 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 ORC3Q9UBD5 711 aaPredicted RBP6.58□□□□□ -1.36
CLPX-202ENST00000558103 HECAQ9UBI9 543 aaPredicted RBP6.58□□□□□ -1.36
CLPX-202ENST00000558103 MTRRQ9UBK8 725 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 CDH7Q9ULB5 785 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 EDARQ9UNE0 448 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 EML5Q05BV3 1969 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 GREB1Q4ZG55 1949 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 MYO16Q9Y6X6 1858 aa6.58□□□□□ -1.36
CLPX-202ENST00000558103 KIAA1549LQ6ZVL6 1849 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 KMT2BQ9UMN6 2715 aaPredicted RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 A0A087WWV3 80 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 KANSL1LA0AUZ9 987 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 MED19A0JLT2 244 aaPredicted RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 SHISA7A6NL88 538 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 CAPN14A8MX76 684 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 BTBD18B2RXH4 712 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ACKR2O00590 384 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 MATN3O15232 486 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 CCL16O15467 120 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 MED24O75448 989 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 PRKCBP05771 671 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 THP07101 528 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 NAMPTP43490 491 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ST3GAL1Q11201 340 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ELAVL2Q12926 359 aaKnown RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 PRPF4BQ13523 1007 aaKnown RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 MLF2Q15773 248 aaPredicted RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 ME3Q16798 604 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ZNF528Q3MIS6 628 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 USP39Q53GS9 565 aaKnown RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 PPM1LQ5SGD2 360 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 PDXDC1Q6P996 788 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 CD300LGQ6UXG3 332 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 MTSS1LQ765P7 747 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 CEP57Q86XR8 500 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ZBTB8OSQ8IWT0 167 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 DIS3L2Q8IYB7 885 aaKnown RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 KIAA2013Q8IYS2 634 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 NSUN7Q8NE18 718 aaKnown RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 OR5M3Q8NGP4 307 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ITFG1Q8TB96 612 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms