RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 G3BP2Q9UN86 482 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 PCDHGB5Q9Y5G0 923 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 TIMM44O43615 452 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 HBP1O60381 514 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 ARIH2O95376 493 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 LTFP02788 710 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 C2P06681 752 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 EPHA3P29320 983 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 SCNN1AP37088 669 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 SLC26A2P50443 739 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 NR1H2P55055 460 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 PKNOX1P55347 436 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 ART3Q13508 389 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 APOFQ13790 326 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 CEACAM7Q14002 265 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 AMHR2Q16671 573 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 CELF3Q5SZQ8 465 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 BORAQ6PGQ7 559 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 STRADAQ7RTN6 431 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 NT5DC4Q86YG4 428 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 LILRA2Q8N149 483 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF567Q8N184 647 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 OR52K1Q8NGK4 314 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 ITFG2Q969R8 447 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 DRC3Q9H069 523 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 WDR41Q9HAD4 459 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 EFCAB1Q9HAE3 211 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 TIMMDC1Q9NPL8 285 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 BFARQ9NZS9 450 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 HSFX1Q9UBD0 423 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 PRSS51A0A1B0GVH4 220 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SLCO1B7G3V0H7 640 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 BCAS2O75934 225 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CHRNGP07510 517 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CD1EP15812 388 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 PRKAA2P54646 552 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 HPCAP84074 193 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 POU5F1BQ06416 359 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 PRKAA1Q13131 559 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 FRG1Q14331 258 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 C6orf52Q5T4I8 152 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 PID1Q7Z2X4 250 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 GALNT4Q8N4A0 578 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 RDH11Q8TC12 318 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 STON2Q8WXE9 905 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 USP13Q92995 863 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 PPP1R36Q96LQ0 422 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 PKP2Q99959 881 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 MRPL1Q9BYD6 325 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SENP6Q9GZR1 1112 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SMARCAD1Q9H4L7 1026 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CAB39LQ9H9S4 337 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 DDX18Q9NVP1 670 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 VTI1BQ9UEU0 232 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 FZD10Q9ULW2 581 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 FZD1Q9UP38 647 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CDYLQ9Y232 598 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SNX9Q9Y5X1 595 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 A0A087WZ62 844 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CAPNS1P04632 268 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 LCP1P13796 627 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 MSX2P35548 267 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CSE1LP55060 971 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 MS4A2Q01362 244 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CREB5Q02930 508 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 GK3PQ14409 553 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 RFTN1Q14699 578 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 DLG2Q15700 870 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 LIPMQ5VYY2 423 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 ARHGAP17Q68EM7 881 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SAMD7Q7Z3H4 446 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF410Q86VK4 478 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 RIOX2Q8IUF8 465 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SLC7A14Q8TBB6 771 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 IRGQQ8WZA9 623 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SPATA33Q96N06 139 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 TSNARE1Q96NA8 513 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CATSPER2Q96P56 530 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 AGAP2Q99490 1192 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 FDXACB1Q9BRP7 624 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 ACE2Q9BYF1 805 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 NUF2Q9BZD4 464 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF385DQ9H6B1 395 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 CNOT11Q9UKZ1 510 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 VANGL2Q9ULK5 521 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 GMEB1Q9Y692 573 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 SCN1AP35498 2009 aa12.05□□□□□ -0.48
VIPAS39-211ENST00000557658 PEX10O60683 326 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 TADA2AO75478 443 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 PIGNO95427 931 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 AMHP03971 560 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 ARF4P18085 180 aaPredicted RBP12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 GRIA4P48058 902 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 GTF2A2P52657 109 aa12.04□□□□□ -0.48
VIPAS39-211ENST00000557658 CDKL1Q00532 357 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms