RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TMEM120AQ9BXJ8 343 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 POLDIP3Q9BY77 421 aaKnown RBP4.62□□□□□ -1.67
VRK1-207ENST00000557352 B3GNT4Q9C0J1 378 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 FZD10Q9ULW2 581 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 PHTF1Q9UMS5 762 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 ASNA1O43681 348 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 CHRNB2P17787 502 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 ABCB4P21439 1286 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 DUSP6Q16828 381 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 DNTTIP2Q5QJE6 756 aaKnown RBP4.61□□□□□ -1.67
VRK1-207ENST00000557352 FNBP1LQ5T0N5 605 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 FAM83HQ6ZRV2 1179 aaPredicted RBP4.61□□□□□ -1.67
VRK1-207ENST00000557352 TMEM200AQ86VY9 491 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 CCDC25Q86WR0 208 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 CAMK1DQ8IU85 385 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 FAM185AQ8N0U4 392 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 TMEM217Q8N7C4 229 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 CMASQ8NFW8 434 aaPredicted RBP4.61□□□□□ -1.67
VRK1-207ENST00000557352 LMO3Q8TAP4 145 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 ARL15Q9NXU5 204 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 CNTN6Q9UQ52 1028 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 PKP3Q9Y446 797 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 SLC4A4Q9Y6R1 1079 aa4.61□□□□□ -1.67
VRK1-207ENST00000557352 TCRBV7S3A2A0A539 114 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 FAM90A18PA6NE21 464 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 FAM90A16PA6NEW6 464 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 MBD3L5A6NJ08 208 aaPredicted RBP4.6□□□□□ -1.67
VRK1-207ENST00000557352 FAM90A9PA6NNJ1 464 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 FAM90A5PA8MXJ8 464 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 PPM1GO15355 546 aaPredicted RBP4.6□□□□□ -1.67
VRK1-207ENST00000557352 KRT86O43790 486 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 LARGE1O95461 756 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 NBPF7P0C2Y1 421 aaPredicted RBP4.6□□□□□ -1.67
VRK1-207ENST00000557352 FAM90A15PP0C7V4 464 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 FAM90A14PP0C7W9 464 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 KLRC2P26717 231 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 GNALP38405 381 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 RRP1P56182 461 aaKnown RBP4.6□□□□□ -1.67
VRK1-207ENST00000557352 ZP1P60852 638 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 KRT81Q14533 505 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 SHBQ15464 509 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 BTBD16Q32M84 506 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 TRIM60Q495X7 471 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 ZNF628Q5EBL2 1059 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 PRAMEF19Q5SWL8 479 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 SLC30A9Q6PML9 568 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 ANKS1BQ7Z6G8 1248 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 GATAD2AQ86YP4 633 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 HMGB4Q8WW32 186 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 ADAMTS14Q8WXS8 1223 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 PPP1R10Q96QC0 940 aaKnown RBP4.6□□□□□ -1.67
VRK1-207ENST00000557352 MYD88Q99836 296 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 TM6SF1Q9BZW5 370 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 CATSPERBQ9H7T0 1116 aa4.6□□□□□ -1.67
VRK1-207ENST00000557352 AGAP5A6NIR3 686 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 AQP12BA6NM10 295 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 RCAN1P53805 252 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 PMS2P54278 862 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
VRK1-207ENST00000557352 VWA5B1Q5TIE3 1220 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 IL31Q6EBC2 164 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 Q6ZSV7 163 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 ZNF367Q7RTV3 350 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 SYTL1Q8IYJ3 562 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 DPP10Q8N608 796 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 LRRC57Q8N9N7 239 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 DEPTORQ8TB45 409 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 RSC1A1Q92681 617 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 SGCZQ96LD1 299 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 NPAS1Q99742 590 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 CDT1Q9H211 546 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 C6orf106Q9H6K1 298 aaPredicted RBP4.59□□□□□ -1.67
VRK1-207ENST00000557352 RMI1Q9H9A7 625 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 ACTR5Q9H9F9 607 aaPredicted RBP4.59□□□□□ -1.67
VRK1-207ENST00000557352 TXLNGQ9NUQ3 528 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 LZTS1Q9Y250 596 aa4.59□□□□□ -1.67
VRK1-207ENST00000557352 STMND1H3BQB6 276 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 GLUD1P00367 558 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 HOXB9P17482 250 aaPredicted RBP4.58□□□□□ -1.68
VRK1-207ENST00000557352 GLUD2P49448 558 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 PDLIM4P50479 330 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 ART1P52961 327 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 GAS1P54826 345 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 DSC1Q08554 894 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 PLK5Q496M5 336 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 CCDC181Q5TID7 509 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 TMEM71Q6P5X7 295 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 KIAA1324Q6UXG2 1013 aaKnown RBP4.58□□□□□ -1.68
VRK1-207ENST00000557352 NR2C2APQ86WQ0 139 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 ENDOVQ8N8Q3 282 aaKnown RBP4.58□□□□□ -1.68
VRK1-207ENST00000557352 OR1N1Q8NGS0 311 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 BICD2Q8TD16 824 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 STYXQ8WUJ0 223 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 DNASE2BQ8WZ79 361 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 HIPK3Q9H422 1215 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 LIN7CQ9NUP9 197 aaKnown RBP4.58□□□□□ -1.68
VRK1-207ENST00000557352 ZDHHC7Q9NXF8 308 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 PLEKHB1Q9UF11 243 aaPredicted RBP4.58□□□□□ -1.68
VRK1-207ENST00000557352 PCDHA10Q9Y5I2 948 aa4.58□□□□□ -1.68
VRK1-207ENST00000557352 RSF1Q96T23 1441 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms