RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 NYNRINQ9P2P1 1898 aaKnown RBP12.95□□□□□ -0.34
PSEN1-221ENST00000557293 UBR5O95071 2799 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-221ENST00000557293 KIF26BQ2KJY2 2108 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 RNF103O00237 685 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 SCAMP1O15126 338 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 SLC31A1O15431 190 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
PSEN1-221ENST00000557293 RNGTTO60942 597 aaKnown RBP12.94□□□□□ -0.34
PSEN1-221ENST00000557293 YEATS4O95619 227 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 LTFP02788 710 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 RGS7P49802 495 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-221ENST00000557293 PLK1P53350 603 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 NFKB2Q00653 900 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 CDH18Q13634 790 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 SETMARQ53H47 684 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-221ENST00000557293 SGO2Q562F6 1265 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 C3orf38Q5JPI3 329 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 KRT39Q6A163 491 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 CCDC81Q6ZN84 652 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 SLC22A18ASQ8N1D0 253 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 IRGQQ8WZA9 623 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 TFAP2BQ92481 460 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 PAGE5Q96GU1 130 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 SPAG5Q96R06 1193 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 MYOCQ99972 504 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 STARD5Q9NSY2 213 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 RAB20Q9NX57 234 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 PCDHGA8Q9Y5G5 932 aa12.94□□□□□ -0.34
PSEN1-221ENST00000557293 PIK3R2O00459 728 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 ATP9BO43861 1147 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 NEBLO76041 1014 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 MOCS3O95396 460 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 PRLRP16471 622 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 NR2F2P24468 414 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 RBMS1P29558 406 aaKnown RBP12.93□□□□□ -0.34
PSEN1-221ENST00000557293 GTF2H1P32780 548 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 CLDN2P57739 230 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
PSEN1-221ENST00000557293 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 ZNF542PQ5EBM4 170 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 PIP5KL1Q5T9C9 394 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 ABI3BPQ7Z7G0 1075 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 CLEC14AQ86T13 490 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 FAM186BQ8IYM0 893 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 SIX6OS1Q8N1H7 587 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 FBXL13Q8NEE6 735 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 IFI44Q8TCB0 444 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 MAPK15Q8TD08 544 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
PSEN1-221ENST00000557293 BMFQ96LC9 184 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
PSEN1-221ENST00000557293 ABCG4Q9H172 646 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 FZD3Q9NPG1 666 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 GPR27Q9NS67 375 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 EXOC1Q9NV70 894 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 HESX1Q9UBX0 185 aa12.93□□□□□ -0.34
PSEN1-221ENST00000557293 ZFR2Q9UPR6 939 aaKnown RBP12.93□□□□□ -0.34
PSEN1-221ENST00000557293 A0A1W2PQU0 124 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 MCF2LO15068 1137 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 SUV39H1O43463 412 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-221ENST00000557293 NOBOXO60393 691 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-221ENST00000557293 SETSIPP0DME0 302 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 VDRP11473 427 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 KRT13P13646 458 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 PSMC2P35998 433 aaKnown RBP12.92□□□□□ -0.34
PSEN1-221ENST00000557293 DUSP3P51452 185 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-221ENST00000557293 SYPL2Q5VXT5 272 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 GUSBP11Q6P575 273 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 LCLAT1Q6UWP7 414 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 GCNT7Q6ZNI0 430 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 CCDC150Q8NCX0 1101 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 OR52K2Q8NGK3 314 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 OR8D1Q8WZ84 308 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 GRAMD1AQ96CP6 724 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 IFT43Q96FT9 208 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 USP29Q9HBJ7 922 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 PREBQ9HCU5 417 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 NAALADL1Q9UQQ1 740 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 TLR6Q9Y2C9 796 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 COQ4Q9Y3A0 265 aa12.92□□□□□ -0.34
PSEN1-221ENST00000557293 DOPEY2Q9Y3R5 2298 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 EME2A4GXA9 379 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 RNF225M0QZC1 329 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 CTSLP07711 333 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 CD19P15391 556 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 PDGFRAP16234 1089 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 TACR2P21452 398 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 PDX1P52945 283 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 SRSF6Q13247 344 aaKnown RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 NNTQ13423 1086 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 ADAM9Q13443 819 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 EIF4EBP2Q13542 120 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 SLC12A1Q13621 1099 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms