RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 LOXL2Q9Y4K0 774 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 USP3Q9Y6I4 520 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 PDZD2O15018 2839 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 FBN3Q75N90 2809 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 NTN3O00634 580 aaPredicted RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 SLC7A4O43246 635 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 AQP9O43315 295 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 IDEP14735 1019 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 GRNP28799 593 aaKnown RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 AKT2P31751 481 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 ETV5P41161 510 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 STK19P49842 368 aaPredicted RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 MAPK10P53779 464 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 ZNF445P59923 1031 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 YWHAGP61981 247 aaKnown RBP eCLIP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 CYP24A1Q07973 514 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 BIRC3Q13489 604 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 FZD2Q14332 565 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 PSMD6Q15008 389 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 SNRNP35Q16560 246 aaKnown RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 PITRM1Q5JRX3 1037 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 AGBL4Q5VU57 503 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 ARL6IP4Q66PJ3 421 aaKnown RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 CAPRIN2Q6IMN6 1127 aaKnown RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 GCNT7Q6ZNI0 430 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 CARNMT1Q8N4J0 409 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 WDR48Q8TAF3 677 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 NDRG1Q92597 394 aaKnown RBP12.93□□□□□ -0.34
PSEN1-220ENST00000557037 USP7Q93009 1102 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 FAM131CQ96AQ9 280 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 DNAJC19Q96DA6 116 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 CYFIP2Q96F07 1278 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 IFT43Q96FT9 208 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 IL12RB2Q99665 862 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 SFMBT1Q9UHJ3 866 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 KLF15Q9UIH9 416 aa12.93□□□□□ -0.34
PSEN1-220ENST00000557037 APCP25054 2843 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 MSI1O43347 362 aaKnown RBP12.92□□□□□ -0.34
PSEN1-220ENST00000557037 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
PSEN1-220ENST00000557037 NME1P15531 152 aaKnown RBP12.92□□□□□ -0.34
PSEN1-220ENST00000557037 SLC6A4P31645 630 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 RPIAP49247 311 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 TAS2R38P59533 333 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
PSEN1-220ENST00000557037 ELAVL3Q14576 367 aaKnown RBP12.92□□□□□ -0.34
PSEN1-220ENST00000557037 PIK3R6Q5UE93 754 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 RNF219Q5W0B1 726 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-220ENST00000557037 DTX1Q86Y01 620 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 KDM1BQ8NB78 822 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 FIBINQ8TAL6 211 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 NAT6Q93015 286 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 GFM1Q96RP9 751 aaKnown RBP12.92□□□□□ -0.34
PSEN1-220ENST00000557037 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 STOML2Q9UJZ1 356 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 CSNK1G3Q9Y6M4 447 aa12.92□□□□□ -0.34
PSEN1-220ENST00000557037 CELSR1Q9NYQ6 3014 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 ADGRG4Q8IZF6 3080 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 A0A087X0B3 334 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 PRR19A6NJB7 356 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 D6RAR5 112 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 H3BM21 787 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 TMX2-CTNND1H3BSU7 103 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 CSF2P04141 144 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 PRKCGP05129 697 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 CASP4P49662 377 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 CYP2J2P51589 502 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 CCL7P80098 99 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 ALCAMQ13740 583 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 NCOA4Q13772 614 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 ZNF284Q2VY69 593 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 RILPL1Q5EBL4 403 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 FSCBQ5H9T9 825 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 MAMDC2Q7Z304 686 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-220ENST00000557037 ARHGAP18Q8N392 663 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 GLMNQ92990 594 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 MYEOVQ96EZ4 313 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 ABHD17AQ96GS6 310 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 BOCQ9BWV1 1114 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 VRTNQ9H8Y1 702 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 OLFML3Q9NRN5 406 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 RABGEF1Q9UJ41 708 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 PADI4Q9UM07 663 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 CCDC168Q8NDH2 2452 aa12.91□□□□□ -0.34
PSEN1-220ENST00000557037 SPENQ96T58 3664 aaKnown RBP12.91□□□□□ -0.34
PSEN1-220ENST00000557037 SPG11Q96JI7 2443 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 A0A1W2PQ27 194 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 A0A1W2PQ64 194 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 A0A1W2PQC6 194 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 C9orf172C9J069 976 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 STX6O43752 255 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 VPS4BO75351 444 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 CLDN1O95832 211 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 RPLP0P05388 317 aaKnown RBP12.9□□□□□ -0.34
PSEN1-220ENST00000557037 SLFN14P0C7P3 912 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms