RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PRKCIP41743 596 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 GCNT1Q02742 428 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 KLHL30Q0D2K2 578 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 TRPC3Q13507 836 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 NCOA4Q13772 614 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 TEAD4Q15561 434 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 SGSM1Q2NKQ1 1148 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 HGSNATQ68CP4 663 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 FBXL19Q6PCT2 694 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 CLEC20AQ6ZU45 233 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 C17orf53Q8N3J3 647 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-219ENST00000556951 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 SNRNP27Q8WVK2 155 aaKnown RBP13.19□□□□□ -0.3
PSEN1-219ENST00000556951 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 NRSN2Q9GZP1 204 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 LHX5Q9H2C1 402 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 TMEM245Q9H330 911 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 EBF2Q9HAK2 575 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 ARHGAP20Q9P2F6 1191 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 FTSJ1Q9UET6 329 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 GOLGA6L9A6NEM1 432 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 EIF3CLB5ME19 914 aaKnown RBP13.18□□□□□ -0.3
PSEN1-219ENST00000556951 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-219ENST00000556951 NDUFA10O95299 355 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 LDOC1O95751 146 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-219ENST00000556951 IGHV4-34P06331 123 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 C1SP09871 688 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 CCDC175P0C221 793 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 RPS14P62263 151 aaKnown RBP13.18□□□□□ -0.3
PSEN1-219ENST00000556951 KRT83P78385 493 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 ARHGAP44Q17R89 818 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 C10orf120Q5SQS8 335 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 BROXQ5VW32 411 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 HIST2H2BCQ6DN03 193 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 PPM1KQ8N3J5 372 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 ZNF366Q8N895 744 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 TAF4BQ92750 862 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 TATDN2Q93075 761 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 LGMNQ99538 433 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 EIF3CQ99613 913 aaKnown RBP13.18□□□□□ -0.3
PSEN1-219ENST00000556951 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 TRMT1Q9NXH9 659 aaKnown RBP13.18□□□□□ -0.3
PSEN1-219ENST00000556951 AGO1Q9UL18 857 aaKnown RBP13.18□□□□□ -0.3
PSEN1-219ENST00000556951 ICE1Q9Y2F5 2266 aa13.18□□□□□ -0.3
PSEN1-219ENST00000556951 VILLO15195 856 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 TIMM44O43615 452 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 AKR1B10O60218 316 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 DFNA5O60443 496 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 GFPT2O94808 682 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 FSBPO95073 299 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 IPO7O95373 1038 aaKnown RBP13.17□□□□□ -0.3
PSEN1-219ENST00000556951 LCA5LO95447 670 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 SEMA4FO95754 770 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-219ENST00000556951 ACTN2P35609 894 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 CHKAP35790 457 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 ACADVLP49748 655 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 KIF11P52732 1056 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 NDST1P52848 882 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 ARID5AQ03989 594 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 EIF4HQ15056 248 aaKnown RBP13.17□□□□□ -0.3
PSEN1-219ENST00000556951 SPA17Q15506 151 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 ASTE1Q2TB18 679 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-219ENST00000556951 ZNF667Q5HYK9 610 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 ANKS1BQ7Z6G8 1248 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 KIAA0907Q7Z7F0 614 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-219ENST00000556951 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 FAM217AQ8IXS0 508 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 FAM71AQ8IYT1 594 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 SAP25Q8TEE9 199 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 SHC3Q92529 594 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 FAXDC2Q96IV6 333 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
PSEN1-219ENST00000556951 KREMEN1Q96MU8 473 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 SLC2A11Q9BYW1 496 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 DEF6Q9H4E7 631 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 PRSS16Q9NQE7 514 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 USP3Q9Y6I4 520 aa13.17□□□□□ -0.3
PSEN1-219ENST00000556951 WNT9AO14904 365 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 SUV39H1O43463 412 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 RFPL3O75679 317 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 ASS1P00966 412 aaKnown RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 ADORA2BP29275 332 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 HNF1BP35680 557 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 RACK1P63244 317 aaKnown RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
PSEN1-219ENST00000556951 HES3Q5TGS1 186 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 SERPINA13PQ6UXR4 307 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 VPS36Q86VN1 386 aa13.16□□□□□ -0.3
PSEN1-219ENST00000556951 CACTIN-AS1Q8N1I8 211 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms